RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 MRPS5P82675 430 aaKnown RBP15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 TKFCQ3LXA3 575 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 PPP2R2DQ66LE6 453 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 SPRYD3Q8NCJ5 442 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 CTCFLQ8NI51 663 aaPredicted RBP15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 VAT1LQ9HCJ6 419 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 CCPG1Q9ULG6 757 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 MYH6P13533 1939 aa15.49■□□□□ 0.07
TUBA4A-209ENST00000475683 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 EPOPA6NHQ4 379 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 NFIBO00712 420 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 PLA2G6O60733 806 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 ANP32AP39687 249 aaKnown RBP15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 BAATQ14032 418 aaPredicted RBP15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 ASPRV1Q53RT3 343 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 KRT40Q6A162 431 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 IQSEC1Q6DN90 963 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 TMTC3Q6ZXV5 915 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 DEFB128Q7Z7B8 93 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 MORC4Q8TE76 937 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 PHKBQ93100 1093 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 MTIF3Q9H2K0 278 aaKnown RBP15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 CERS4Q9HA82 394 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 SLC4A7Q9Y6M7 1214 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 KIAA1217Q5T5P2 1943 aa15.48■□□□□ 0.07
TUBA4A-209ENST00000475683 JAK2O60674 1132 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 FDPSP14324 419 aaKnown RBP15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 KIF5BP33176 963 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 ALDH5A1P51649 535 aaPredicted RBP15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 PURAQ00577 322 aaKnown RBP15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 PPP2R5BQ15173 497 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 GPATCH4Q5T3I0 446 aaKnown RBP15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 BTNL9Q6UXG8 535 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 SLC30A10Q6XR72 485 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 SPRED2Q7Z698 418 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 ADGRF4Q8IZF3 695 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 NSUN7Q8NE18 718 aaKnown RBP15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 RIOX1Q9H6W3 641 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 VTA1Q9NP79 307 aa15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 RBM28Q9NW13 759 aaKnown RBP15.47■□□□□ 0.07
TUBA4A-209ENST00000475683 BRWD1Q9NSI6 2320 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 ZEB2O60315 1214 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 ICAM1P05362 532 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 CA3P07451 260 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 MYL3P08590 195 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 ATP2A2P16615 1042 aaKnown RBP15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 IFNAR1P17181 557 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 KCNQ1P51787 676 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 DUSP28Q4G0W2 176 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 COPS5Q92905 334 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 RANBP17Q9H2T7 1088 aaKnown RBP15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 JMJD4Q9H9V9 463 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 Q9Y3F1 56 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 PCDHA11Q9Y5I1 949 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 V9GY48 417 aaPredicted RBP15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 MYH7BA7E2Y1 1941 aa15.46■□□□□ 0.07
TUBA4A-209ENST00000475683 CCDC196A0A1B0GTZ2 297 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 CPLX1O14810 134 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 BMP1P13497 986 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 GNAQP50148 359 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 BECN1Q14457 450 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 SYDE2Q5VT97 1194 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 PIGSQ96S52 555 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 WDR11Q9BZH6 1224 aa15.45■□□□□ 0.06
TUBA4A-209ENST00000475683 CNTNAP5Q8WYK1 1306 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 SMARCA1P28370 1054 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 SSRP1Q08945 709 aaKnown RBP15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 PKN1Q16512 942 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 NBPF20Q3BBV1 942 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 RPUSD2Q8IZ73 545 aaKnown RBP15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 OR6J1Q8NGC5 347 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 CLEC4DQ8WXI8 215 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 MTMR8Q96EF0 704 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 LZTS2Q9BRK4 669 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 SLC26A6Q9BXS9 759 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 MTCH2Q9Y6C9 303 aa15.44■□□□□ 0.06
TUBA4A-209ENST00000475683 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 PRPF3O43395 683 aaKnown RBP15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 DHX16O60231 1041 aaKnown RBP15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 CALML3P27482 149 aa15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 FAM47CQ5HY64 1035 aa15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 AIFM3Q96NN9 605 aa15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 LLPHQ9BRT6 129 aaKnown RBP15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 ORC3Q9UBD5 711 aaPredicted RBP15.43■□□□□ 0.06
TUBA4A-209ENST00000475683 PPP1R11O60927 126 aaPredicted RBP15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 ARIH2O95376 493 aa15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 GJB2P29033 226 aa15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 SKIV2LQ15477 1246 aaKnown RBP15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 TMCO2Q7Z6W1 182 aaPredicted RBP15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 HOMER1Q86YM7 354 aa15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 INTS4Q96HW7 963 aaKnown RBP15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 MTG1Q9BT17 334 aaPredicted RBP15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 SEZ6LQ9BYH1 1024 aa15.42■□□□□ 0.06
TUBA4A-209ENST00000475683 SIP14410 1827 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms