RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 C2orf27AQ580R0 203 aa9.64□□□□□ -0.87
SMC5-203ENST00000475540 KISS1RQ969F8 398 aaPredicted RBP9.64□□□□□ -0.87
SMC5-203ENST00000475540 PPARGC1AQ9UBK2 798 aaKnown RBP9.64□□□□□ -0.87
SMC5-203ENST00000475540 FAM47E-STBD1D6RA91 191 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 SOD2P04179 222 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 NAT1P18440 290 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 GRK2P25098 689 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 GRK3P35626 688 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 CACNB2Q08289 660 aaPredicted RBP9.63□□□□□ -0.87
SMC5-203ENST00000475540 KRTAP19-4Q3LI73 84 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 MTDHQ86UE4 582 aaKnown RBP9.63□□□□□ -0.87
SMC5-203ENST00000475540 KCNJ15Q99712 375 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 EPB41L4AQ9HCS5 686 aaPredicted RBP9.63□□□□□ -0.87
SMC5-203ENST00000475540 ZNF652Q9Y2D9 606 aa9.63□□□□□ -0.87
SMC5-203ENST00000475540 TADA3O75528 432 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 APPP05067 770 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 C6orf222P0C671 652 aaPredicted RBP9.62□□□□□ -0.87
SMC5-203ENST00000475540 MC3RP41968 323 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 LIMS1P48059 325 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 EMC4Q5J8M3 183 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 TCERG1LQ5VWI1 586 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 ETV3LQ6ZN32 361 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 B3GNT8Q7Z7M8 397 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 C1QL4Q86Z23 238 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 PWWP2AQ96N64 755 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 SMOC1Q9H4F8 434 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 SLC6A20Q9NP91 592 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 PCDHB4Q9Y5E5 795 aa9.62□□□□□ -0.87
SMC5-203ENST00000475540 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
SMC5-203ENST00000475540 GNAT1P11488 350 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 AFF3P51826 1226 aaKnown RBP9.61□□□□□ -0.87
SMC5-203ENST00000475540 GUCY1A3Q02108 690 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 SPIRE1Q08AE8 756 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 SIAH1Q8IUQ4 282 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 DACT3Q96B18 629 aaPredicted RBP9.61□□□□□ -0.87
SMC5-203ENST00000475540 DDX11Q96FC9 970 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 YIPF4Q9BSR8 244 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 PTCH2Q9Y6C5 1203 aa9.61□□□□□ -0.87
SMC5-203ENST00000475540 PAK1Q13153 545 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 OTOP3Q7RTS5 596 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 ZC3H18Q86VM9 953 aaKnown RBP9.6□□□□□ -0.87
SMC5-203ENST00000475540 MIB1Q86YT6 1006 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 SMARCC2Q8TAQ2 1214 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 PIP4K2CQ8TBX8 421 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 PHOSPHO1Q8TCT1 267 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 IPPKQ9H8X2 491 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 NGRNQ9NPE2 291 aaKnown RBP9.6□□□□□ -0.87
SMC5-203ENST00000475540 NUB1Q9Y5A7 615 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 PCDHA8Q9Y5H6 950 aa9.6□□□□□ -0.87
SMC5-203ENST00000475540 EFCAB14O75071 495 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 TRIM48Q8IWZ4 208 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 FAM126BQ8IXS8 530 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 PCDH18Q9HCL0 1135 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 MYOTQ9UBF9 498 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 NDOR1Q9UHB4 597 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 PMF1-BGLAPU3KQ54 211 aa9.59□□□□□ -0.87
SMC5-203ENST00000475540 TCRBV5S2A0A599 114 aa9.58□□□□□ -0.88
SMC5-203ENST00000475540 CYP2C8P10632 490 aa9.58□□□□□ -0.88
SMC5-203ENST00000475540 COL6A2P12110 1019 aa9.58□□□□□ -0.88
SMC5-203ENST00000475540 USP35Q9P2H5 1018 aa9.58□□□□□ -0.88
SMC5-203ENST00000475540 PCDHA9Q9Y5H5 950 aa9.58□□□□□ -0.88
SMC5-203ENST00000475540 ARRDC4Q8NCT1 418 aa9.57□□□□□ -0.88
SMC5-203ENST00000475540 SLC27A2O14975 620 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 CRTAMO95727 393 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 NKX3-2P78367 333 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 CAP1Q01518 475 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 SH3TC2Q8TF17 1288 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 FBXW5Q969U6 566 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 TOE1Q96GM8 510 aaKnown RBP9.56□□□□□ -0.88
SMC5-203ENST00000475540 MAGEB10Q96LZ2 347 aaPredicted RBP9.56□□□□□ -0.88
SMC5-203ENST00000475540 MRPL4Q9BYD3 311 aaKnown RBP9.56□□□□□ -0.88
SMC5-203ENST00000475540 PIF1Q9H611 641 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 ASH2LQ9UBL3 628 aa9.56□□□□□ -0.88
SMC5-203ENST00000475540 GSTA4O15217 222 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 C8BP07358 591 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 LCNL1Q6ZST4 164 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 FAM26EQ8N5C1 309 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 PCDH19Q8TAB3 1148 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 FNIP1Q8TF40 1166 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 CATSPERZQ9NTU4 200 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 DTLQ9NZJ0 730 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 DSEQ9UL01 958 aa9.55□□□□□ -0.88
SMC5-203ENST00000475540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.54□□□□□ -0.88
SMC5-203ENST00000475540 ARVCFO00192 962 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 NKRFO15226 690 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMC5-203ENST00000475540 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
SMC5-203ENST00000475540 SRGAP2CP0DJJ0 459 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 STAT5AP42229 794 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 ST5P78524 1137 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 TRIM61Q5EBN2 209 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 ZC3H7AQ8IWR0 971 aaKnown RBP9.54□□□□□ -0.88
SMC5-203ENST00000475540 UHMK1Q8TAS1 419 aaKnown RBP9.54□□□□□ -0.88
SMC5-203ENST00000475540 SLC7A14Q8TBB6 771 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 SFMBT1Q9UHJ3 866 aa9.54□□□□□ -0.88
SMC5-203ENST00000475540 WNT9AO14904 365 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 HTRA3P83110 453 aa9.53□□□□□ -0.88
SMC5-203ENST00000475540 VMACQ2NL98 169 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms