RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 FAM86B2P0C5J1 330 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.57
PCCB-213ENST00000475214 BMP6P22004 513 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 ERCC5P28715 1186 aaPredicted RBP11.46□□□□□ -0.57
PCCB-213ENST00000475214 CASP1P29466 404 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 GRB10Q13322 594 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 CUL4BQ13620 913 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 PKN2Q16513 984 aaKnown RBP11.46□□□□□ -0.57
PCCB-213ENST00000475214 TKFCQ3LXA3 575 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 MOB2Q70IA6 237 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 ERO1BQ86YB8 467 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 ETNPPLQ8TBG4 499 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 MTRQ99707 1265 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 GTPBP4Q9BZE4 634 aaKnown RBP11.46□□□□□ -0.57
PCCB-213ENST00000475214 MAF1Q9H063 256 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 ADAMTS5Q9UNA0 930 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 PARP14Q460N5 1801 aa11.46□□□□□ -0.58
PCCB-213ENST00000475214 MANSC4A6NHS7 340 aaPredicted RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 NFIBO00712 420 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 CXCL11O14625 94 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 MSH4O15457 936 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 CCT6AP40227 531 aaKnown RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 ZNF75DP51815 510 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 SETQ01105 290 aaPredicted RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 KCNB1Q14721 858 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 TMEM119Q4V9L6 283 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 MUM1L1Q5H9M0 696 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 HYIQ5T013 277 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 ZNF658Q5TYW1 1059 aaPredicted RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 HAUS3Q68CZ6 603 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 RNF207Q6ZRF8 634 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 PLA2G4DQ86XP0 818 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 LARP4BQ92615 738 aaKnown RBP11.45□□□□□ -0.58
PCCB-213ENST00000475214 LENG9Q96B70 501 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 C7orf25Q9BPX7 421 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 HOMER2Q9NSB8 354 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 OTOFQ9HC10 1997 aa11.45□□□□□ -0.58
PCCB-213ENST00000475214 RBBP6Q7Z6E9 1792 aaKnown RBP11.44□□□□□ -0.58
PCCB-213ENST00000475214 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 SPDYE5A6NIY4 337 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 TPM3P06753 285 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 CDC25BP30305 580 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 UBXN2AP68543 259 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 NCAPHQ15003 741 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 SPRYD7Q5W111 196 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 SNRNP48Q6IEG0 339 aaKnown RBP11.44□□□□□ -0.58
PCCB-213ENST00000475214 NSMFQ6X4W1 530 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 GADL1Q6ZQY3 521 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 CTU1Q7Z7A3 348 aaKnown RBP11.44□□□□□ -0.58
PCCB-213ENST00000475214 DRC7Q8IY82 874 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 PROCA1Q8NCQ7 364 aaPredicted RBP11.44□□□□□ -0.58
PCCB-213ENST00000475214 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 SYTL5Q8TDW5 730 aaPredicted RBP11.44□□□□□ -0.58
PCCB-213ENST00000475214 RAD54LQ92698 747 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 GJA10Q969M2 543 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 MRFAP1L1Q96HT8 127 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 MXRA8Q9BRK3 442 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 TEX13BQ9BXU2 312 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 RNF146Q9NTX7 359 aa11.44□□□□□ -0.58
PCCB-213ENST00000475214 RLFQ13129 1914 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 A0A0G2JLL6 359 aaPredicted RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 HOXA7P31268 230 aaPredicted RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 STAT3P40763 770 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 PPP1R2P41236 205 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 SOX10P56693 466 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 RPS6P62753 249 aaKnown RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 PPIL2Q13356 520 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 STIM1Q13586 685 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 DHX8Q14562 1220 aaKnown RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 MCM6Q14566 821 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 KMT5BQ4FZB7 885 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 NIPA1Q7RTP0 329 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 PRRT2Q7Z6L0 340 aaPredicted RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 KCTD17Q8N5Z5 321 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 MB21D1Q8N884 522 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 CYP2W1Q8TAV3 490 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 WNK4Q96J92 1243 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 NUDT12Q9BQG2 462 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 TRIM9Q9C026 710 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
PCCB-213ENST00000475214 BLOC1S4Q9NUP1 217 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 EXOC1Q9NV70 894 aa11.43□□□□□ -0.58
PCCB-213ENST00000475214 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
PCCB-213ENST00000475214 PVALEFA0A1B0GWK0 134 aa11.42□□□□□ -0.58
PCCB-213ENST00000475214 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
PCCB-213ENST00000475214 MEIS1O00470 390 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms