RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
RNF220-210ENST00000474394 COPS5Q92905 334 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 PHKBQ93100 1093 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
RNF220-210ENST00000474394 POLR3EQ9NVU0 708 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 PRKAG2Q9UGJ0 569 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 DDX41Q9UJV9 622 aaKnown RBP12.35□□□□□ -0.43
RNF220-210ENST00000474394 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
RNF220-210ENST00000474394 KPNA6O60684 536 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
RNF220-210ENST00000474394 TGFB3P10600 412 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 NEK4P51957 841 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
RNF220-210ENST00000474394 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
RNF220-210ENST00000474394 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
RNF220-210ENST00000474394 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 A6NJR5 290 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 DCDC2CA8MYV0 355 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 ARVCFO00192 962 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 RGS20O76081 388 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 MYL3P08590 195 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 AK2P54819 239 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.44
RNF220-210ENST00000474394 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
RNF220-210ENST00000474394 TLE2Q04725 743 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 ARHGAP1Q07960 439 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 LAMC2Q13753 1193 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 SHHQ15465 462 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 PKN1Q16512 942 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 DHX37Q8IY37 1157 aaKnown RBP12.33□□□□□ -0.44
RNF220-210ENST00000474394 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
RNF220-210ENST00000474394 TOX2Q96NM4 488 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 INPP4AQ96PE3 977 aaPredicted RBP12.33□□□□□ -0.44
RNF220-210ENST00000474394 SEZ6LQ9BYH1 1024 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 C6orf50Q9HD87 102 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 RTEL1Q9NZ71 1219 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 TPCN1Q9ULQ1 816 aa12.33□□□□□ -0.44
RNF220-210ENST00000474394 FIBPO43427 364 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 PFKFB2O60825 505 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 PQBP1O60828 265 aaKnown RBP12.32□□□□□ -0.44
RNF220-210ENST00000474394 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 CDKL5O76039 1030 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 DEXIO95424 95 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 GNA11P29992 359 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 ICAM3P32942 547 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
RNF220-210ENST00000474394 AP3B2Q13367 1082 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 ITGA7Q13683 1181 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 MCTP2Q6DN12 878 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 ANKRD33Q7Z3H0 272 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 NLRX1Q86UT6 975 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
RNF220-210ENST00000474394 MTG1Q9BT17 334 aaPredicted RBP12.32□□□□□ -0.44
RNF220-210ENST00000474394 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
RNF220-210ENST00000474394 UPF2Q9HAU5 1272 aaKnown RBP12.32□□□□□ -0.44
RNF220-210ENST00000474394 PRDM5Q9NQX1 630 aaPredicted RBP12.32□□□□□ -0.44
RNF220-210ENST00000474394 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
RNF220-210ENST00000474394 GGPS1O95749 300 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 MMP3P08254 477 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 CLTBP09497 229 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 UBA1P22314 1058 aaKnown RBP12.31□□□□□ -0.44
RNF220-210ENST00000474394 CDK7P50613 346 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 SCRN1Q12765 414 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 NEDD9Q14511 834 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 DGKDQ16760 1214 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 CELF3Q5SZQ8 465 aaKnown RBP12.31□□□□□ -0.44
RNF220-210ENST00000474394 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 CDHR1Q96JP9 859 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 MLXIPQ9HAP2 919 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 SH3GLB2Q9NR46 395 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
RNF220-210ENST00000474394 BDP1A6H8Y1 2624 aa12.31□□□□□ -0.44
RNF220-210ENST00000474394 LTBP2Q14767 1821 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 XIRP2A4UGR9 3374 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 CLK2P49760 499 aaKnown RBP12.3□□□□□ -0.44
RNF220-210ENST00000474394 PSMC6P62333 389 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 SP2Q02086 613 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 JAKMIP3Q5VZ66 844 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 REXO1Q8N1G1 1221 aaKnown RBP12.3□□□□□ -0.44
RNF220-210ENST00000474394 PPTC7Q8NI37 304 aa12.3□□□□□ -0.44
RNF220-210ENST00000474394 ATXN2LQ8WWM7 1075 aaKnown RBP12.3□□□□□ -0.44
RNF220-210ENST00000474394 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms