RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GPT2Q8TD30 523 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 SNX29Q8TEQ0 813 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 SOCS4Q8WXH5 440 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 GPRASP2Q96D09 838 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 PORCNQ9H237 461 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 TMEM60Q9H2L4 133 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 USP25Q9UHP3 1055 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 SAMM50Q9Y512 469 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 MRVI1Q9Y6F6 885 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 FAM86B1E9PN63 330 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 AOC2O75106 756 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 PGK2P07205 417 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 FAM86B2P0C5J1 330 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 LIG1P18858 919 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 ADORA2AP29274 412 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 NDUFA8P51970 172 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 FCGRTP55899 365 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 CNTN2Q02246 1040 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 ARHGEF6Q15052 776 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 AXDND1Q5T1B0 1012 aaPredicted RBP11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 KCNV1Q6PIU1 500 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 SHC4Q6S5L8 630 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 PDILTQ8N807 584 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 IQUBQ8NA54 791 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 GIMAP8Q8ND71 665 aaPredicted RBP11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 CRYGNQ8WXF5 182 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 MBOAT7Q96N66 472 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 NT5C3AQ9H0P0 336 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 JADE2Q9NQC1 790 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 TBC1D22BQ9NU19 505 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 PKD2L1Q9P0L9 805 aa11.56□□□□□ -0.56
PRPF38A-202ENST00000474048 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 DDX39AO00148 427 aaKnown RBP11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 MEIS1O00470 390 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 MSH4O15457 936 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 POLR2DO15514 142 aaKnown RBP11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 SLC26A4O43511 780 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 CHMP2AO43633 222 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 NR1I2O75469 434 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 ZNF202O95125 648 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 CCT6AP40227 531 aaKnown RBP11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 RRAGBQ5VZM2 374 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 VSIG10LQ86VR7 867 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 FAM133AQ8N9E0 248 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 IL31RAQ8NI17 732 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 CCDC47Q96A33 483 aaKnown RBP11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 DHX58Q96C10 678 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 MTMR9Q96QG7 549 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 RIT2Q99578 217 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 NUDT12Q9BQG2 462 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 CUEDC2Q9H467 287 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 KCNMB3Q9NPA1 279 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 UBIAD1Q9Y5Z9 338 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 ZNF236Q9UL36 1845 aa11.55□□□□□ -0.56
PRPF38A-202ENST00000474048 IGLV3-22A0A075B6J6 115 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 POTEMA6NI47 508 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 RGS2P41220 211 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 JAK3P52333 1124 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 AMPD3Q01432 767 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 KRT76Q01546 638 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 GRIN1Q05586 938 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 GRB14Q14449 540 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 SASS6Q6UVJ0 657 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 SEPT14Q6ZU15 432 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 IGSF22Q8N9C0 903 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 ETNPPLQ8TBG4 499 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 NEK9Q8TD19 979 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 EPSTI1Q96J88 318 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 ZFP91Q96JP5 570 aaPredicted RBP11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 TIGD1Q96MW7 591 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 PURBQ96QR8 312 aaKnown RBP11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 CCSER1Q9C0I3 900 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 LRRC27Q9C0I9 530 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 CLSTN2Q9H4D0 955 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 MAGEF1Q9HAY2 307 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 DISC1Q9NRI5 854 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 ADGRA2Q96PE1 1338 aa11.54□□□□□ -0.56
PRPF38A-202ENST00000474048 LCTP09848 1927 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 SMC2O95347 1197 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 ARP10275 920 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 ITGB5P18084 799 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 HOXD10P28358 340 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 SFNP31947 248 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 VEGFBP49765 207 aa11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 MRPS9P82933 396 aaKnown RBP11.53□□□□□ -0.56
PRPF38A-202ENST00000474048 MAP2K5Q13163 448 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms