RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	DHX37	Q8IY37	1157 aa	Known RBP	6.6	□□□□□ -1.35
BBX-223	ENST00000473542	PPM1K	Q8N3J5	372 aa		6.6	□□□□□ -1.35
BBX-223	ENST00000473542	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.6	□□□□□ -1.35
BBX-223	ENST00000473542	CHAC2	Q8WUX2	184 aa		6.6	□□□□□ -1.35
BBX-223	ENST00000473542	MMP19	Q99542	508 aa		6.6	□□□□□ -1.35
BBX-223	ENST00000473542	NDOR1	Q9UHB4	597 aa		6.6	□□□□□ -1.35
BBX-223	ENST00000473542	GSG1L2	A8MUP6	293 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	FADS2P1	A8MWK0	482 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542		B4E1Z4	1266 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	FGF10	O15520	208 aa	Predicted RBP	6.59	□□□□□ -1.35
BBX-223	ENST00000473542	MEFV	O15553	781 aa	Predicted RBP	6.59	□□□□□ -1.35
BBX-223	ENST00000473542	MYCLP1	P12525	358 aa	Predicted RBP	6.59	□□□□□ -1.35
BBX-223	ENST00000473542	SOX5	P35711	763 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	LTBR	P36941	435 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	AMPD3	Q01432	767 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	PRSS53	Q2L4Q9	553 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	USP53	Q70EK8	1073 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	TMC6	Q7Z403	805 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	BRAP	Q7Z569	592 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	LRRTM3	Q86VH5	581 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	AHI1	Q8N157	1196 aa		6.59	□□□□□ -1.35
BBX-223	ENST00000473542	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
BBX-223	ENST00000473542	DDX1	Q92499	740 aa	Known RBP	6.59	□□□□□ -1.35
BBX-223	ENST00000473542	MAGEB10	Q96LZ2	347 aa	Predicted RBP	6.59	□□□□□ -1.35
BBX-223	ENST00000473542	PDE8A	O60658	829 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	DNAJC8	O75937	253 aa	Predicted RBP	6.58	□□□□□ -1.36
BBX-223	ENST00000473542	GSTM1	P09488	218 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	PAM	P19021	973 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	SDS	P20132	328 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	IGFALS	P35858	605 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	GPR85	P60893	370 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	C21orf62-AS1	Q17RA5	79 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	RNF180	Q86T96	592 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	IFNL3	Q8IZI9	196 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	PWWP2A	Q96N64	755 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	PCDHA5	Q9Y5H7	936 aa		6.58	□□□□□ -1.36
BBX-223	ENST00000473542	NUDT19	A8MXV4	375 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	TBC1D8	O95759	1140 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	PLS3	P13797	630 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	FLT3	P36888	993 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	RAB3GAP1	Q15042	981 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	SP8	Q8IXZ3	490 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	DIO2	Q92813	273 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	SCLY	Q96I15	445 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	FCRL2	Q96LA5	508 aa	Predicted RBP	6.57	□□□□□ -1.36
BBX-223	ENST00000473542	PTCHD1	Q96NR3	888 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	LUC7L	Q9NQ29	371 aa	Known RBP	6.57	□□□□□ -1.36
BBX-223	ENST00000473542	GPRC5C	Q9NQ84	441 aa		6.57	□□□□□ -1.36
BBX-223	ENST00000473542	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	TCRBV16S1A1N1	A0A5B0	115 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	BLACE	A4D250	179 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	ADRB1	P08588	477 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	PRKCA	P17252	672 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	KRTAP5-3	Q6L8H2	238 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	LINC01356	Q8N9X3	169 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	ORAI3	Q9BRQ5	295 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	PHF20	Q9BVI0	1012 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	TARS2	Q9BW92	718 aa	Known RBP	6.56	□□□□□ -1.36
BBX-223	ENST00000473542	AP5S1	Q9NUS5	200 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	TYW1	Q9NV66	732 aa	Known RBP	6.56	□□□□□ -1.36
BBX-223	ENST00000473542	ERVK13-1	Q9NX77	482 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	TAF6L	Q9Y6J9	622 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	ASXL2	Q76L83	1435 aa		6.56	□□□□□ -1.36
BBX-223	ENST00000473542	FAM83G	A6ND36	823 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	ARVCF	O00192	962 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	ARNTL	O00327	626 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	ABLIM1	O14639	778 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	WNT9A	O14904	365 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	PRICKLE3	O43900	615 aa	Predicted RBP	6.55	□□□□□ -1.36
BBX-223	ENST00000473542	BUB1B	O60566	1050 aa	Predicted RBP	6.55	□□□□□ -1.36
BBX-223	ENST00000473542	CRTAM	O95727	393 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	MPO	P05164	745 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	LIMS1	P48059	325 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	GALNT18	Q6P9A2	607 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	LBX2	Q6XYB7	198 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	FGD2	Q7Z6J4	655 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	SLCO6A1	Q86UG4	719 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	CCDC103	Q8IW40	242 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	TEPSIN	Q96N21	525 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	CDADC1	Q9BWV3	514 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	TNFRSF12A	Q9NP84	129 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	CLEC1B	Q9P126	229 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	TNFRSF10D	Q9UBN6	386 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	TMEFF2	Q9UIK5	374 aa	Predicted RBP	6.55	□□□□□ -1.36
BBX-223	ENST00000473542	TRAF6	Q9Y4K3	522 aa		6.55	□□□□□ -1.36
BBX-223	ENST00000473542	TNPO3	Q9Y5L0	923 aa	Known RBP	6.55	□□□□□ -1.36
BBX-223	ENST00000473542	FFAR3	O14843	346 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	OPA1	O60313	960 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	CPE	P16870	476 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	GTF2A2	P52657	109 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	GUCY1A3	Q02108	690 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	KIZ	Q2M2Z5	673 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	HLA-DQA1	Q5Y7H0	255 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	OLFML2B	Q68BL8	750 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	KCNT2	Q6UVM3	1135 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	RPTN	Q6XPR3	784 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	UBE2R2	Q712K3	238 aa	Predicted RBP	6.54	□□□□□ -1.36
BBX-223	ENST00000473542	KIF18B	Q86Y91	864 aa		6.54	□□□□□ -1.36
BBX-223	ENST00000473542	RPUSD2	Q8IZ73	545 aa	Known RBP	6.54	□□□□□ -1.36
BBX-223	ENST00000473542	BDH2	Q9BUT1	245 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms