RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ZNF233A6NK53 670 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 SFMBT2Q5VUG0 894 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 RNASE9P60153 205 aaKnown RBP15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 GUCY1A3Q02108 690 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 PNMA5Q96PV4 448 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 H0YHG0 523 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 LSP1P33241 339 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 USP8P40818 1118 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 MNAT1P51948 309 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 BICDL1Q6ZP65 573 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 LRRC55Q6ZSA7 311 aa15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 SEC63Q9UGP8 760 aaKnown RBP15.71■□□□□ 0.11
NHLRC3-204ENST00000473371 NR1D1P20393 614 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 CALCRLQ16602 461 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 TMEM266Q2M3C6 531 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 SPTY2D1Q68D10 685 aaPredicted RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 SPATS2Q86XZ4 545 aaKnown RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 CASKIN2Q8WXE0 1202 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 SPZ1Q9BXG8 430 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 SERPING1P05155 500 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 NT5C2P49902 561 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 REXO1Q8N1G1 1221 aaKnown RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 CEP89Q96ST8 783 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 LSM14BQ9BX40 385 aaKnown RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 NUCKS1Q9H1E3 243 aaKnown RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 EPN3Q9H201 632 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 CEP72Q9P209 647 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 RBAK-RBAKDNI3L0D1 243 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 EHHADHQ08426 723 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 MICALCLQ6ZW33 695 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 MAATS1Q7Z4T9 603 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 RIC8AQ9NPQ8 531 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 TMEM260Q9NX78 707 aa15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 PACSIN2Q9UNF0 486 aaPredicted RBP15.7■□□□□ 0.1
NHLRC3-204ENST00000473371 GRID2IPA4D2P6 1211 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 MEFVO15553 781 aaPredicted RBP15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 POLR2FP61218 127 aaKnown RBP15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 NAB2Q15742 525 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 ENOX2Q16206 610 aaKnown RBP15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 MREGQ8N565 214 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 GLIS3Q8NEA6 775 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 WHAMMQ8TF30 809 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 TRAF5O00463 557 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 KLRC1P26715 233 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 ARID5AQ03989 594 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 SNX29Q8TEQ0 813 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 PIK3R5Q8WYR1 880 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 RAD54LQ92698 747 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 DDX12PQ92771 950 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 SAP30BPQ9UHR5 308 aaKnown RBP15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 COL4A3BPQ9Y5P4 624 aa15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 ATXN2Q99700 1313 aaKnown RBP15.69■□□□□ 0.1
NHLRC3-204ENST00000473371 TLR2O60603 784 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 SWT1Q5T5J6 900 aaKnown RBP15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 NAA35Q5VZE5 725 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 KCNV1Q6PIU1 500 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 USP17L2Q6R6M4 530 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 CD302Q8IX05 232 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 MYOCDQ8IZQ8 938 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 CNPY4Q8N129 248 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 TGFBRAP1Q8WUH2 860 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 ATP6V1G3Q96LB4 118 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 CCDC88AQ3V6T2 1871 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 DOT1LQ8TEK3 1739 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 POTEMA6NI47 508 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 PPP1R37O75864 691 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 CLSTN1O94985 981 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 TNNC1P63316 161 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 RAPGEF1Q13905 1077 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 KLHL7Q8IXQ5 586 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 ZNF473Q8WTR7 871 aaKnown RBP15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 TAF4BQ92750 862 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 PIGSQ96S52 555 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 RAB34Q9BZG1 259 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 MYH14Q7Z406 1995 aaKnown RBP15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 PSMD2Q13200 908 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 TRADDQ15628 312 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 PTGISQ16647 500 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 KIAA0753Q2KHM9 967 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 CEP85LQ5SZL2 805 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 MEI1Q5TIA1 1274 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 PROM2Q8N271 834 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 SYN2Q92777 582 aaPredicted RBP15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 MTMR9Q96QG7 549 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 LRRC27Q9C0I9 530 aa15.68■□□□□ 0.1
NHLRC3-204ENST00000473371 RAD51CO43502 376 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 LDHBP07195 334 aaKnown RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 RASA1P20936 1047 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms