RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 EIF5BO60841 1220 aaKnown RBP22.31■■□□□ 1.16
COMMD1-208ENST00000472729 RGS20O76081 388 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 CYP2C9P11712 490 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 UBA1P22314 1058 aaKnown RBP22.31■■□□□ 1.16
COMMD1-208ENST00000472729 EPHB4P54760 987 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 PTGISQ16647 500 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 ZNF697Q5TEC3 545 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 GIMAP8Q8ND71 665 aaPredicted RBP22.31■■□□□ 1.16
COMMD1-208ENST00000472729 ALG1Q9BT22 464 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 NOC4LQ9BVI4 516 aaKnown RBP22.31■■□□□ 1.16
COMMD1-208ENST00000472729 IL23AQ9NPF7 189 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 CYP46A1Q9Y6A2 500 aa22.31■■□□□ 1.16
COMMD1-208ENST00000472729 FGBP02675 491 aa22.3■■□□□ 1.16
COMMD1-208ENST00000472729 ACRP10323 421 aa22.3■■□□□ 1.16
COMMD1-208ENST00000472729 ADCY7P51828 1080 aa22.3■■□□□ 1.16
COMMD1-208ENST00000472729 SMAD3P84022 425 aaKnown RBP22.3■■□□□ 1.16
COMMD1-208ENST00000472729 MFSD10Q14728 455 aa22.3■■□□□ 1.16
COMMD1-208ENST00000472729 PPP1R18Q6NYC8 613 aa22.3■■□□□ 1.16
COMMD1-208ENST00000472729 TEX2Q8IWB9 1127 aa22.3■■□□□ 1.16
COMMD1-208ENST00000472729 INPP4AQ96PE3 977 aaPredicted RBP22.3■■□□□ 1.16
COMMD1-208ENST00000472729 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.3■■□□□ 1.16
COMMD1-208ENST00000472729 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
COMMD1-208ENST00000472729 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
COMMD1-208ENST00000472729 SPATA31C2B4DYI2 1134 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 PSEN2P49810 448 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 MRPS9P82933 396 aaKnown RBP22.29■■□□□ 1.16
COMMD1-208ENST00000472729 UBE2SQ16763 222 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 KIAA0753Q2KHM9 967 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 WWC2Q6AWC2 1192 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 CCDC12Q8WUD4 166 aaPredicted RBP22.29■■□□□ 1.16
COMMD1-208ENST00000472729 PCDHA6Q9UN73 950 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 PCDHA8Q9Y5H6 950 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 FRMPD4Q14CM0 1322 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 CNTNAP5Q8WYK1 1306 aa22.29■■□□□ 1.16
COMMD1-208ENST00000472729 LRRC37A2A6NM11 1700 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 SMCO2A6NFE2 343 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 FOSP01100 380 aaPredicted RBP22.28■■□□□ 1.16
COMMD1-208ENST00000472729 ZNF286BP0CG31 522 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 ICAM3P32942 547 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 HSDL1Q3SXM5 330 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 METTL7BQ6UX53 244 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 RUFY3Q7L099 469 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 Q7L0L9 218 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 CYFIP1Q7L576 1253 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 PPP1R13LQ8WUF5 828 aa22.28■■□□□ 1.16
COMMD1-208ENST00000472729 PFKMP08237 780 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 ADD1P35611 737 aaKnown RBP22.27■■□□□ 1.16
COMMD1-208ENST00000472729 SP2Q02086 613 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 SP4Q02446 784 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 TMEM240Q5SV17 173 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 FAM109BQ6ICB4 259 aaPredicted RBP22.27■■□□□ 1.16
COMMD1-208ENST00000472729 GPRASP2Q96D09 838 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 RIC8AQ9NPQ8 531 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 BARHL2Q9NY43 387 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 UMODL1Q5DID0 1318 aa22.27■■□□□ 1.16
COMMD1-208ENST00000472729 LCTP09848 1927 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 PITPNM1O00562 1244 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 F2P00734 622 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 ACTN1P12814 892 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 CDC27P30260 824 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 MTMR1Q13613 665 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 SESTD1Q86VW0 696 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 FBXL16Q8N461 479 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 KAT2BQ92831 832 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 SCLYQ96I15 445 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 FAM161BQ96MY7 647 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 SENP7Q9BQF6 1050 aa22.26■■□□□ 1.15
COMMD1-208ENST00000472729 FTOQ9C0B1 505 aaKnown RBP eCLIP22.26■■□□□ 1.15
COMMD1-208ENST00000472729 ZNF215Q9UL58 517 aaPredicted RBP22.26■■□□□ 1.15
COMMD1-208ENST00000472729 LAMA3Q16787 3333 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 ZBBXA8MT70 800 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 MAFGO15525 162 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 RFC2P35250 354 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 ZNF76P36508 570 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 OTOP2Q7RTS6 562 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 DEFB128Q7Z7B8 93 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 CAGE1Q8TC20 777 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 ZSWIM6Q9HCJ5 1215 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 HDAC6Q9UBN7 1215 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 GTF2IRD1Q9UHL9 959 aa22.25■■□□□ 1.15
COMMD1-208ENST00000472729 H3BRB1 525 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 STXBP3O00186 592 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 CPLX1O14810 134 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 SCG2P13521 617 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 FUT2Q10981 343 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 PFKFB3Q16875 520 aaPredicted RBP22.24■■□□□ 1.15
COMMD1-208ENST00000472729 GDF6Q6KF10 455 aaPredicted RBP22.24■■□□□ 1.15
COMMD1-208ENST00000472729 CPLX2Q6PUV4 134 aaKnown RBP22.24■■□□□ 1.15
COMMD1-208ENST00000472729 C16orf59Q7L2K0 433 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 WNT8AQ9H1J5 351 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 TUT1Q9H6E5 874 aaKnown RBP22.24■■□□□ 1.15
COMMD1-208ENST00000472729 C6orf50Q9HD87 102 aa22.24■■□□□ 1.15
COMMD1-208ENST00000472729 FAM217BQ9NTX9 383 aaPredicted RBP22.24■■□□□ 1.15
COMMD1-208ENST00000472729 GNAT1P11488 350 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 HOXD8P13378 290 aaPredicted RBP22.23■■□□□ 1.15
COMMD1-208ENST00000472729 GNA11P29992 359 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 AP3B2Q13367 1082 aa22.23■■□□□ 1.15
COMMD1-208ENST00000472729 UTP14CQ5TAP6 766 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms