RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SNCAIPQ9Y6H5 919 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 SLC4A7Q9Y6M7 1214 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 DIP2BQ9P265 1576 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 LRRC14BA6NHZ5 514 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 F8W8V4 182 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 LPLP06858 475 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 COL6A2P12110 1019 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 MAPK9P45984 424 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 GALNT1Q10472 559 aaPredicted RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 AP3B2Q13367 1082 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 RRP12Q5JTH9 1297 aaKnown RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 FIGNL1Q6PIW4 674 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 MAATS1Q7Z4T9 603 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CPNE8Q86YQ8 564 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 MRPL41Q8IXM3 137 aaKnown RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 FAM186BQ8IYM0 893 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 MYCT1Q8N699 235 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CYB5D2Q8WUJ1 264 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 PPM1EQ8WY54 764 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 KCTD13Q8WZ19 329 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 TRIM47Q96LD4 638 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CCDC74BQ96LY2 380 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 SCLT1Q96NL6 688 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 PLCD4Q9BRC7 762 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 EMILIN2Q9BXX0 1053 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ZFYVE1Q9HBF4 777 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 SMURF1Q9HCE7 757 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 TCF7L1Q9HCS4 588 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ITM2CQ9NQX7 267 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 BTG4Q9NY30 223 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 STAP2Q9UGK3 403 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ITGB1BP2Q9UKP3 347 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 FBXL21Q9UKT6 434 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 U3KQE9 123 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ADGRL1O94910 1474 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ZNF608Q9ULD9 1512 aaPredicted RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 A0A087WZG4 1122 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CCDC163A0A0D9SF12 145 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 ARVCFO00192 962 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 NOP56O00567 594 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 TERTO14746 1132 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 ZEB2O60315 1214 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 SNX2O60749 519 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 GAS7O60861 476 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 PPM1BO75688 479 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 SLITRK5O94991 958 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CD3EP07766 207 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 SETSIPP0DME0 302 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 RBP3P10745 1247 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 ATP1A3P13637 1013 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 PLS3P13797 630 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 SART3Q15020 963 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 TAF5Q15542 800 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CT83Q5H943 113 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 LCE2CQ5TA81 110 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 ARMCX6Q7L4S7 300 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 C7orf61Q8IZ16 206 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 AHI1Q8N157 1196 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 VWA5B2Q8N398 1253 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 NKAPQ8N5F7 415 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 CAMKK1Q8N5S9 505 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 DNAJB8Q8NHS0 232 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 COPS5Q92905 334 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 FCRL3Q96P31 734 aaPredicted RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 NAP1L4Q99733 375 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 NLRC4Q9NPP4 1024 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 DMRT3Q9NQL9 472 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CRIM1Q9NZV1 1036 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 ATXN7L1Q9ULK2 861 aaPredicted RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 PCDHGB2Q9Y5G2 931 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 TOPBP1Q92547 1522 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 GLI2P10070 1586 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 GOLGA8AA7E2F4 631 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 GOLGA8BA8MQT2 603 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 EYA2O00167 538 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 PQBP1O60828 265 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 PRAMEF1O95521 474 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CYP11A1P05108 521 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CPEP16870 476 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 PEX2P28328 305 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CYP2C19P33261 490 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 KPNA1P52294 538 aaPredicted RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 TERF1P54274 439 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 ZRSR2Q15696 482 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 TOR2AQ5JU69 321 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 RNFT1Q5M7Z0 435 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 EFCAB2Q5VUJ9 269 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 FAM180BQ6P0A1 224 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 CHST15Q7LFX5 561 aaPredicted RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 OTOP3Q7RTS5 596 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 HEATR4Q86WZ0 1026 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 TRIM22Q8IYM9 498 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 IFNL2Q8IZJ0 200 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 PLD6Q8N2A8 252 aaKnown RBP3.29□□□□□ -1.88
XRN1-210ENST00000472697 NELL1Q92832 810 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 KREMEN1Q96MU8 473 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 SLC13A1Q9BZW2 595 aa3.29□□□□□ -1.88
XRN1-210ENST00000472697 QRSL1Q9H0R6 528 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms