RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 PCDHA1Q9Y5I3 950 aa23.07■■□□□ 1.28
SNX21-209ENST00000472219 COL4A3BPQ9Y5P4 624 aa23.07■■□□□ 1.28
SNX21-209ENST00000472219 CYP3A7-CYP3A51PA0A087WV96 503 aa23.06■■□□□ 1.28
SNX21-209ENST00000472219 TARSL2A2RTX5 802 aaKnown RBP23.06■■□□□ 1.28
SNX21-209ENST00000472219 NPM3O75607 178 aaKnown RBP23.06■■□□□ 1.28
SNX21-209ENST00000472219 LCA5LO95447 670 aa23.06■■□□□ 1.28
SNX21-209ENST00000472219 CYP3A7P24462 503 aa23.06■■□□□ 1.28
SNX21-209ENST00000472219 KCNK18Q7Z418 384 aa23.06■■□□□ 1.28
SNX21-209ENST00000472219 C2CD5Q86YS7 1000 aa23.06■■□□□ 1.28
SNX21-209ENST00000472219 FAM207AQ9NSI2 230 aaPredicted RBP23.06■■□□□ 1.28
SNX21-209ENST00000472219 L1RE1Q9UN81 338 aa23.06■■□□□ 1.28
SNX21-209ENST00000472219 POLR3GO15318 223 aaPredicted RBP23.05■■□□□ 1.28
SNX21-209ENST00000472219 CYP2C19P33261 490 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 QRICH1Q2TAL8 776 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 CERKLQ49MI3 558 aaPredicted RBP23.05■■□□□ 1.28
SNX21-209ENST00000472219 CCDC70Q6NSX1 233 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 ALS2CR12Q96Q35 445 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 ANO3Q9BYT9 981 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 LACRTQ9GZZ8 138 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 ABCB6Q9NP58 842 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 JRKLQ9Y4A0 524 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 ENC1O14682 589 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 KIF11P52732 1056 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 CCDC40Q4G0X9 1142 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 CACNA2D4Q7Z3S7 1137 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 KRT27Q7Z3Y8 459 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 ERMNQ8TAM6 284 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 CAGE1Q8TC20 777 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 TANGO6Q9C0B7 1094 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 KCNMB3Q9NPA1 279 aa23.05■■□□□ 1.28
SNX21-209ENST00000472219 TRAF5O00463 557 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 AKR1B10O60218 316 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 TRIM37O94972 964 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 SSBP05455 408 aaKnown RBP eCLIP23.04■■□□□ 1.28
SNX21-209ENST00000472219 USP14P54578 494 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 VSNL1P62760 191 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 CDC37Q16543 378 aaPredicted RBP23.04■■□□□ 1.28
SNX21-209ENST00000472219 ZCWPW2Q504Y3 356 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 SLFN13Q68D06 897 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 PPP4R3CPQ6ZMV5 832 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 NOA1Q8NC60 698 aaKnown RBP23.04■■□□□ 1.28
SNX21-209ENST00000472219 MBOAT7Q96N66 472 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 MXD3Q9BW11 206 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 IDI2Q9BXS1 227 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 LUC7LQ9NQ29 371 aaKnown RBP23.04■■□□□ 1.28
SNX21-209ENST00000472219 PCDHA13Q9Y5I0 950 aa23.04■■□□□ 1.28
SNX21-209ENST00000472219 PITPNM2Q9BZ72 1349 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 SSU72P8A0A1W2PR75 194 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 TBX3O15119 743 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 PLA2G4BP0C869 781 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 EEF2P13639 858 aaKnown RBP23.03■■□□□ 1.28
SNX21-209ENST00000472219 NFIAQ12857 509 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 RRAGAQ7L523 313 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 FLAD1Q8NFF5 587 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 SYN2Q92777 582 aaPredicted RBP23.03■■□□□ 1.28
SNX21-209ENST00000472219 SH2D4AQ9H788 454 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 KIAA1024Q9UPX6 916 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 ARFGEF1Q9Y6D6 1849 aa23.03■■□□□ 1.28
SNX21-209ENST00000472219 MACROD2A1Z1Q3 448 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 CYP27A1Q02318 531 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 ECM1Q16610 540 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 STRIP1Q5VSL9 837 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 TMEM179Q6ZVK1 233 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 JADE2Q9NQC1 790 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 ARHGAP20Q9P2F6 1191 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 HDAC6Q9UBN7 1215 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 FAM184BQ9ULE4 1060 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 ADAMTSL1Q8N6G6 1762 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 RCCD1A6NED2 376 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 LRRC53A6NM62 1247 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 FOSP01100 380 aaPredicted RBP23.02■■□□□ 1.28
SNX21-209ENST00000472219 PRLRP16471 622 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 EIF4A3P38919 411 aaKnown RBP23.02■■□□□ 1.28
SNX21-209ENST00000472219 MARSP56192 900 aaKnown RBP23.02■■□□□ 1.28
SNX21-209ENST00000472219 LRRC41Q15345 812 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 PDXDC1Q6P996 788 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 GPBP1Q86WP2 473 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 AMNQ9BXJ7 453 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 CEP72Q9P209 647 aa23.02■■□□□ 1.28
SNX21-209ENST00000472219 USP17L15C9J2P7 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L13C9JLJ4 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L11C9JVI0 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L18D6R9N7 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L22D6RA61 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L17D6RBQ6 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L19D6RCP7 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L20D6RJB6 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 RAD21O60216 631 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 TFRCP02786 760 aaKnown RBP23.01■■□□□ 1.27
SNX21-209ENST00000472219 KRT18P05783 430 aaKnown RBP23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L24Q0WX57 530 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 MAPK8IP2Q13387 824 aaPredicted RBP23.01■■□□□ 1.27
SNX21-209ENST00000472219 USP17L6PQ6QN14 398 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 MMS19Q96T76 1030 aa23.01■■□□□ 1.27
SNX21-209ENST00000472219 QTRT2Q9H974 415 aaKnown RBP23.01■■□□□ 1.27
SNX21-209ENST00000472219 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.01■■□□□ 1.27
SNX21-209ENST00000472219 ICA1Q05084 483 aa23■■□□□ 1.27
SNX21-209ENST00000472219 ITIH3Q06033 890 aa23■■□□□ 1.27
SNX21-209ENST00000472219 HSP90B2PQ58FF3 399 aa23■■□□□ 1.27
SNX21-209ENST00000472219 TEX2Q8IWB9 1127 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms