RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 PPP2R5EQ16537 467 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 GNPTABQ3T906 1256 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 HSF5Q4G112 596 aaPredicted RBP6□□□□□ -1.45
VPS13A-210ENST00000471439 ADGRF1Q5T601 910 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 SLCO6A1Q86UG4 719 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 VPS37DQ86XT2 251 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 SMARCC1Q92922 1105 aaPredicted RBP6□□□□□ -1.45
VPS13A-210ENST00000471439 ANAPC16Q96DE5 110 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 SPATA32Q96LK8 384 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 FGD4Q96M96 766 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 DNAJC2Q99543 621 aaKnown RBP6□□□□□ -1.45
VPS13A-210ENST00000471439 MCMBPQ9BTE3 642 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 ZNF408Q9H9D4 720 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 CWC22Q9HCG8 908 aaKnown RBP6□□□□□ -1.45
VPS13A-210ENST00000471439 UNC80Q8N2C7 3258 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 MBD5Q9P267 1494 aa6□□□□□ -1.45
VPS13A-210ENST00000471439 SPATA31A1Q5TZJ5 1347 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 COL14A1Q05707 1796 aaKnown RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 PXDNLA1KZ92 1463 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 ETV2O00321 342 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 TSPAN15O95858 294 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 EPHX1P07099 455 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 ETFBP38117 255 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 KIR2DL1P43626 348 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 KIR2DL2P43627 348 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 RTP1P59025 263 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 SLC14A2Q15849 920 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 NOL9Q5SY16 702 aaKnown RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 SPPL2CQ8IUH8 684 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 CPLX3Q8WVH0 158 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 JMJD8Q96S16 334 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 SGPP1Q9BX95 441 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 KLHL25Q9H0H3 589 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 SLC6A17Q9H1V8 727 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 CFDP1Q9UEE9 299 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 FHOD1Q9Y613 1164 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 PEAK1Q9H792 1746 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 C10orf71Q711Q0 1435 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 TRIOBPQ9H2D6 2365 aa5.99□□□□□ -1.45
VPS13A-210ENST00000471439 ZNF644Q9H582 1327 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-210ENST00000471439 CASP8AP2Q9UKL3 1982 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 DBX1A6NMT0 343 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 SSBP05455 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS13A-210ENST00000471439 GSNP06396 782 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 CD3EP07766 207 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 MSL3P1P0C860 447 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 ATP2B1P20020 1258 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 ANKRD39Q53RE8 183 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 IRF2BP1Q8IU81 584 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 LGR4Q9BXB1 951 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 PRR13Q9NZ81 148 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 IMPACTQ9P2X3 320 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 APEX2Q9UBZ4 518 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 SUSD2Q9UGT4 822 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 DUOX2Q9NRD8 1548 aa5.98□□□□□ -1.45
VPS13A-210ENST00000471439 CNTNAP1P78357 1384 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 B2RBV5 119 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 ITGA4P13612 1032 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 RAP1GAPP47736 663 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 SLC7A5Q01650 507 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 C1QL4Q86Z23 238 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 C19orf47Q8N9M1 422 aaKnown RBP5.97□□□□□ -1.45
VPS13A-210ENST00000471439 FCRL3Q96P31 734 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-210ENST00000471439 PHAXQ9H814 394 aaKnown RBP5.97□□□□□ -1.45
VPS13A-210ENST00000471439 TNFRSF10DQ9UBN6 386 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 KCPQ6ZWJ8 1503 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 TECPR2O15040 1411 aa5.97□□□□□ -1.45
VPS13A-210ENST00000471439 RRBP1Q9P2E9 1410 aaKnown RBP5.97□□□□□ -1.45
VPS13A-210ENST00000471439 TNRC6CQ9HCJ0 1690 aaKnown RBP5.97□□□□□ -1.45
VPS13A-210ENST00000471439 PAPPAQ13219 1627 aa5.96□□□□□ -1.45
VPS13A-210ENST00000471439 PHRF1Q9P1Y6 1649 aaKnown RBP5.96□□□□□ -1.45
VPS13A-210ENST00000471439 GCC2Q8IWJ2 1684 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 STXBP3O00186 592 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 VAMP4O75379 141 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 PRKCAP17252 672 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 CFPP27918 469 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 ZNF827Q17R98 1081 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 KIAA1211LQ6NV74 962 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 VHLLQ6RSH7 139 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 ATG14Q6ZNE5 492 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 NAT16Q8N8M0 369 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 NUP43Q8NFH3 380 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 HNRNPLLQ8WVV9 542 aaKnown RBP5.96□□□□□ -1.46
VPS13A-210ENST00000471439 UBXN4Q92575 508 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 CD320Q9NPF0 282 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 STRIP2Q9ULQ0 834 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 TAF6LQ9Y6J9 622 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 VCANP13611 3396 aa5.96□□□□□ -1.46
VPS13A-210ENST00000471439 NPIPB6E9PJ23 425 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 NFIBO00712 420 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 SMAD7O15105 426 aaKnown RBP5.95□□□□□ -1.46
VPS13A-210ENST00000471439 FGF10O15520 208 aaPredicted RBP5.95□□□□□ -1.46
VPS13A-210ENST00000471439 SNX17Q15036 470 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 QSER1Q2KHR3 1735 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 DPY19L1Q2PZI1 675 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 CWF19L1Q69YN2 538 aaKnown RBP5.95□□□□□ -1.46
VPS13A-210ENST00000471439 HEATR6Q6AI08 1181 aaKnown RBP5.95□□□□□ -1.46
VPS13A-210ENST00000471439 SPOCD1Q6ZMY3 1216 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 PKD1L2Q7Z442 2459 aa5.95□□□□□ -1.46
VPS13A-210ENST00000471439 ZNF513Q8N8E2 541 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms