RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FKTNO75072 461 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 PDE6AP16499 860 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 TPP2P29144 1249 aaPredicted RBP8.6□□□□□ -1.03
SMC5-202ENST00000471372 PDE6BP35913 854 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 SCAND1P57086 179 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 PCBP3P57721 371 aaKnown RBP8.6□□□□□ -1.03
SMC5-202ENST00000471372 LACTBP83111 547 aaPredicted RBP8.6□□□□□ -1.03
SMC5-202ENST00000471372 LAPTM5Q13571 262 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 LRRC32Q14392 662 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 ARHGAP44Q17R89 818 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 MINDY4Q4G0A6 757 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 OGFOD3Q6PK18 319 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 EPM2AIP1Q7L775 607 aaPredicted RBP8.6□□□□□ -1.03
SMC5-202ENST00000471372 SHISA5Q8N114 240 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 ANLNQ9NQW6 1124 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 TOPORSQ9NS56 1045 aaPredicted RBP8.6□□□□□ -1.03
SMC5-202ENST00000471372 MKS1Q9NXB0 559 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
SMC5-202ENST00000471372 GNAT3A8MTJ3 354 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 FAM155AB1AL88 458 aaPredicted RBP8.59□□□□□ -1.03
SMC5-202ENST00000471372 MYO1BO43795 1136 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 H2AFYO75367 372 aaKnown RBP8.59□□□□□ -1.03
SMC5-202ENST00000471372 U2AF1L5P0DN76 240 aaPredicted RBP8.59□□□□□ -1.03
SMC5-202ENST00000471372 ZBTB48P10074 688 aaPredicted RBP8.59□□□□□ -1.03
SMC5-202ENST00000471372 SLC9A1P19634 815 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 BCL6P41182 706 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 U2AF1Q01081 240 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMC5-202ENST00000471372 LSAMPQ13449 338 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 MBTPS1Q14703 1052 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 CRY1Q16526 586 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 FSTL4Q6MZW2 842 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 TSPYL5Q86VY4 417 aaPredicted RBP8.59□□□□□ -1.03
SMC5-202ENST00000471372 OSTM1Q86WC4 334 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 CLIP3Q96DZ5 547 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 LRGUKQ96M69 825 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 TBC1D32Q96NH3 1257 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 BOCQ9BWV1 1114 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 CDADC1Q9BWV3 514 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 JAM3Q9BX67 310 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 SMURF1Q9HCE7 757 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 U3KQE9 123 aa8.59□□□□□ -1.03
SMC5-202ENST00000471372 TRBV23OR9-2A0A075B6M9 112 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 DVL2O14641 736 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 KCNK3O14649 394 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 ADAM23O75077 832 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 CFBP00751 764 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 LTFP02788 710 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 PROCP04070 461 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 KRT15P19012 456 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 LPOP22079 712 aaPredicted RBP8.58□□□□□ -1.04
SMC5-202ENST00000471372 CYP2C19P33261 490 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 JAM2P57087 298 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 HTRA3P83110 453 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 ADGRE1Q14246 886 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 TERF2Q15554 542 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 CDKAL1Q5VV42 579 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 ZPBP2Q6X784 338 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 CMTR2Q8IYT2 770 aaKnown RBP8.58□□□□□ -1.04
SMC5-202ENST00000471372 IL17RAQ96F46 866 aa8.58□□□□□ -1.04
SMC5-202ENST00000471372 TRIT1Q9H3H1 467 aaKnown RBP8.58□□□□□ -1.04
SMC5-202ENST00000471372 TIMM13Q9Y5L4 95 aaPredicted RBP8.58□□□□□ -1.04
SMC5-202ENST00000471372 SSU72P8A0A1W2PR75 194 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 C7orf72A4D263 438 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 H7C1D1 291 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
SMC5-202ENST00000471372 AMY2AP04746 511 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 TRIM27P14373 513 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 AMY2BP19961 511 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 PURAQ00577 322 aaKnown RBP8.57□□□□□ -1.04
SMC5-202ENST00000471372 GRM3Q14832 879 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 RGL3Q3MIN7 710 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 NLRP10Q86W26 655 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 PANK1Q8TE04 598 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 DPF3Q92784 378 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 HSPBAP1Q96EW2 488 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 ARPC5LQ9BPX5 153 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 CLDND1Q9NY35 253 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 SPO11Q9Y5K1 396 aa8.57□□□□□ -1.04
SMC5-202ENST00000471372 SLC12A8A0AV02 714 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 LCHNA4D1U4 455 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 FAM170BA6NMN3 283 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 ASGR2P07307 311 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 GPR3P46089 330 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
SMC5-202ENST00000471372 KRT85P78386 507 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 IRF9Q00978 393 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 SAFB2Q14151 953 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMC5-202ENST00000471372 NKPD1Q17RQ9 610 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 IL31Q6EBC2 164 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 ZNF765Q7L2R6 523 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 ZAR1Q86SH2 424 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 RASSF3Q86WH2 238 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 KIAA1958Q8N8K9 716 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 SCYL1Q96KG9 808 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 NACC1Q96RE7 527 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 ELF4Q99607 663 aaPredicted RBP8.56□□□□□ -1.04
SMC5-202ENST00000471372 SARGQ9BW04 601 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms