RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 FKBP1CQ5VVH2 108 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 C1orf229Q6ZS94 237 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 CDC37L1Q7L3B6 337 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 RAB11FIP4Q86YS3 637 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 CRACR2BQ8N4Y2 399 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 GALNT6Q8NCL4 622 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 SLC44A5Q8NCS7 719 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 FBXO18Q8NFZ0 1043 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 NLGN2Q8NFZ4 835 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 FAM151AQ8WW52 585 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 DPF2Q92785 391 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 PRMT6Q96LA8 375 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 ZNF396Q96N95 335 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 LZTS2Q9BRK4 669 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 ALG1Q9BT22 464 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 RNF26Q9BY78 433 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 SCAND2PQ9GZW5 306 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 TDRD3Q9H7E2 651 aaKnown RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 LMBRD1Q9NUN5 540 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 ZNF70Q9UC06 446 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 CFAP45Q9UL16 551 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 PLIN4Q96Q06 1357 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 COL2A1P02458 1487 aaPredicted RBP7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 LAMB1P07942 1786 aa7.03□□□□□ -1.28
SMNDC1-204ENST00000471297 BAZ2AQ9UIF9 1905 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 IGKV6D-41A0A0C4DH26 115 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 A6NHS1 94 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 NDUFB5O43674 189 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 PRPF40AO75400 957 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 BCRP11274 1271 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 SMARCA1P28370 1054 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF280AP59817 542 aaPredicted RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 INSM1Q01101 510 aaPredicted RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 TCP10Q12799 353 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 NFIAQ12857 509 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 GRM4Q14833 912 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF385CQ66K41 422 aaPredicted RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 RCSD1Q6JBY9 416 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 TATDN1Q6P1N9 297 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 TMTC3Q6ZXV5 915 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 BRAPQ7Z569 592 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 FAM83AQ86UY5 434 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 ZSCAN29Q8IWY8 852 aaPredicted RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 CCDC144CPQ8IYA2 1237 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 EDARADDQ8WWZ3 215 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 ZBED3Q96IU2 234 aaPredicted RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 TMEM47Q9BQJ4 181 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 SLC26A6Q9BXS9 759 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 ELP3Q9H9T3 547 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 MTMR4Q9NYA4 1195 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 HERC5Q9UII4 1024 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 PCDHAC2Q9Y5I4 1007 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 DDX49Q9Y6V7 483 aaKnown RBP7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 ATRNL1Q5VV63 1379 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 NAV1Q8NEY1 1877 aa7.02□□□□□ -1.29
SMNDC1-204ENST00000471297 SCN9AQ15858 1988 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 FER1L6Q2WGJ9 1857 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 DDTLA6NHG4 134 aaPredicted RBP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 OIP5O43482 229 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 NMT2O60551 498 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 MMP20O60882 483 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 DTNBO60941 627 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 TTLL1O95922 423 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 MBD3O95983 291 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 SHMT1P34896 483 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 TNNI2P48788 182 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 RASSF7Q02833 373 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 EHHADHQ08426 723 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 KLHL40Q2TBA0 621 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 CERKLQ49MI3 558 aaPredicted RBP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 TTC39BQ5VTQ0 682 aaPredicted RBP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 KRT40Q6A162 431 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 PDE12Q6L8Q7 609 aaKnown RBP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 ARHGAP27Q6ZUM4 889 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF438Q7Z4V0 828 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 USP48Q86UV5 1035 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 FCHSD1Q86WN1 690 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 ZFPM1Q8IX07 1006 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 FAM177A1Q8N128 213 aaPredicted RBP7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 ZSCAN1Q8NBB4 408 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 TNFRSF25Q93038 417 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 PHKBQ93100 1093 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 CITED4Q96RK1 184 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 KANSL2Q9H9L4 492 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 MYOZ2Q9NPC6 264 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 NYAP2Q9P242 653 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 STX8Q9UNK0 236 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 CNPY2Q9Y2B0 182 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 ELP1O95163 1332 aa7.01□□□□□ -1.29
SMNDC1-204ENST00000471297 EP400Q96L91 3159 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 COL4A5P29400 1685 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 ZNF646O15015 1829 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms