RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	IL31RA	Q8NI17	732 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	ERMN	Q8TAM6	284 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	SLC10A4	Q96EP9	437 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	GJA5	P36382	358 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	IRX3	P78415	501 aa	Predicted RBP	29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	PLS1	Q14651	629 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	KCNB1	Q14721	858 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	HAUS3	Q68CZ6	603 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	NCAPH2	Q6IBW4	605 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	SARM1	Q6SZW1	724 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	LARP4B	Q92615	738 aa	Known RBP	29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	PXMP2	Q9NR77	195 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	UBIAD1	Q9Y5Z9	338 aa		29.12	■■■□□ 2.25
U2AF1-208	ENST00000471250	KLRC4	O43908	158 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	PSMD10	O75832	226 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	AR	P10275	920 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	FKBP1B	P68106	108 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	MYL5	Q02045	173 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	PGM5	Q15124	567 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	CHST13	Q8NET6	341 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	RMDN3	Q96TC7	470 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	TRIM9	Q9C026	710 aa		29.11	■■■□□ 2.25
U2AF1-208	ENST00000471250	ITGB5	P18084	799 aa		29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	TPM4	P67936	248 aa		29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	MCM6	Q14566	821 aa		29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	KCNK18	Q7Z418	384 aa		29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	ZFP91	Q96JP5	570 aa	Predicted RBP	29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	PDCD2L	Q9BRP1	358 aa		29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	ASCC2	Q9H1I8	757 aa	Predicted RBP	29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	BTBD7	Q9P203	1132 aa		29.1	■■■□□ 2.25
U2AF1-208	ENST00000471250	EIF2AK2	P19525	551 aa	Known RBP	29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	ERCC5	P28715	1186 aa	Predicted RBP	29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	MRPS9	P82933	396 aa	Known RBP	29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	ZNF658	Q5TYW1	1059 aa	Predicted RBP	29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	LRCH2	Q5VUJ6	765 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	OTOP1	Q7RTM1	612 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	MED24	O75448	989 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	PABPC4	Q13310	644 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	PPP2R5C	Q13362	524 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	ARHGEF16	Q5VV41	709 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	XRRA1	Q6P2D8	792 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	RIOX2	Q8IUF8	465 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	ZNF577	Q9BSK1	485 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	LRRC27	Q9C0I9	530 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	JADE2	Q9NQC1	790 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	CYP39A1	Q9NYL5	469 aa		29.09	■■■□□ 2.25
U2AF1-208	ENST00000471250	SOCS7	O14512	581 aa		29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	RPA1	P27694	616 aa		29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	SNAPC2	Q13487	334 aa		29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	KMT5B	Q4FZB7	885 aa		29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	GPAT2	Q6NUI2	795 aa		29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	ENOX1	Q8TC92	643 aa	Known RBP	29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	A1CF	Q9NQ94	594 aa	Known RBP	29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	KIAA1024	Q9UPX6	916 aa		29.08	■■■□□ 2.25
U2AF1-208	ENST00000471250	POTEB3	A0JP26	581 aa		29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	PPP1R3G	B7ZBB8	358 aa		29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	RHOBTB3	O94955	611 aa		29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	CD44	P16070	742 aa	Known RBP	29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	HERVK_113	P62684	666 aa		29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	POTEB	Q6S5H4	581 aa		29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	PURB	Q96QR8	312 aa	Known RBP	29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	POLR3C	Q9BUI4	534 aa	Predicted RBP	29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	GBA2	Q9HCG7	927 aa	Predicted RBP	29.07	■■■□□ 2.24
U2AF1-208	ENST00000471250	GAS7	O60861	476 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	OSBP	P22059	807 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	ZNF75D	P51815	510 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	DHX8	Q14562	1220 aa	Known RBP	29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	CNNM4	Q6P4Q7	775 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	CATSPER3	Q86XQ3	398 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	RIT2	Q99578	217 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	WDR11	Q9BZH6	1224 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	TRIM5	Q9C035	493 aa		29.06	■■■□□ 2.24
U2AF1-208	ENST00000471250	MYMK	A6NI61	221 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	EML1	O00423	815 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	SPATA31C1	P0DKV0	1188 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	CCDC47	Q96A33	483 aa	Known RBP	29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	TEKT3	Q9BXF9	490 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	SPATC1L	Q9H0A9	340 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	HSD3B7	Q9H2F3	369 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	FBXO40	Q9UH90	709 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	IPO5	O00410	1097 aa	Known RBP	29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	CNMD	O75829	334 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	ASIC1	P78348	528 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	B3GNT9	Q6UX72	402 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	TRIM44	Q96DX7	344 aa	Predicted RBP	29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	EIF2AK1	Q9BQI3	630 aa	Known RBP	29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	KCNH7	Q9NS40	1196 aa		29.05	■■■□□ 2.24
U2AF1-208	ENST00000471250	MYCL	P12524	364 aa	Predicted RBP	29.04	■■■□□ 2.24
U2AF1-208	ENST00000471250	SMYD4	Q8IYR2	804 aa	Predicted RBP	29.04	■■■□□ 2.24
U2AF1-208	ENST00000471250	KCTD17	Q8N5Z5	321 aa		29.04	■■■□□ 2.24
U2AF1-208	ENST00000471250	NSUN6	Q8TEA1	469 aa	Known RBP	29.04	■■■□□ 2.24
U2AF1-208	ENST00000471250	MED15	Q96RN5	788 aa		29.04	■■■□□ 2.24
U2AF1-208	ENST00000471250	AGO4	Q9HCK5	861 aa	Known RBP	29.04	■■■□□ 2.24
U2AF1-208	ENST00000471250		E9PMD0	336 aa		29.03	■■■□□ 2.24
U2AF1-208	ENST00000471250	CCND2	P30279	289 aa		29.03	■■■□□ 2.24
U2AF1-208	ENST00000471250	VSIG10L	Q86VR7	867 aa		29.03	■■■□□ 2.24
U2AF1-208	ENST00000471250	C2orf69	Q8N8R5	385 aa		29.03	■■■□□ 2.24
U2AF1-208	ENST00000471250	GTPBP4	Q9BZE4	634 aa	Known RBP	29.03	■■■□□ 2.24
U2AF1-208	ENST00000471250	NMRK2	Q9NPI5	230 aa		29.03	■■■□□ 2.24
U2AF1-208	ENST00000471250	PVALEF	A0A1B0GWK0	134 aa		29.02	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms