RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
CCM2-204ENST00000470837 TBC1D22BQ9NU19 505 aa11□□□□□ -0.65
CCM2-204ENST00000470837 USP25Q9UHP3 1055 aa11□□□□□ -0.65
CCM2-204ENST00000470837 UBIAD1Q9Y5Z9 338 aa11□□□□□ -0.65
CCM2-204ENST00000470837 TNPO2O14787 897 aaKnown RBP10.99□□□□□ -0.65
CCM2-204ENST00000470837 MSH4O15457 936 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 POLR2DO15514 142 aaKnown RBP10.99□□□□□ -0.65
CCM2-204ENST00000470837 NR1I2O75469 434 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 ZNF202O95125 648 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 ITGB5P18084 799 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 FCGRTP55899 365 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 RRAGBQ5VZM2 374 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 C17orf99Q6UX52 265 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 CABP7Q86V35 215 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 PDILTQ8N807 584 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 FAM133AQ8N9E0 248 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 CNNM3Q8NE01 707 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 IL31RAQ8NI17 732 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 CYP2W1Q8TAV3 490 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 ETNPPLQ8TBG4 499 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 SOCS4Q8WXH5 440 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 EPSTI1Q96J88 318 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
CCM2-204ENST00000470837 RIT2Q99578 217 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 GOLPH3LQ9H4A5 285 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 KCNH7Q9NS40 1196 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 KDM3AQ9Y4C1 1321 aa10.99□□□□□ -0.65
CCM2-204ENST00000470837 IGLV3-22A0A075B6J6 115 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 SLC26A4O43511 780 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 ARP10275 920 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 STAT6P42226 847 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 VEGFBP49765 207 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 MRPS9P82933 396 aaKnown RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 GRIN1Q05586 938 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 GRB14Q14449 540 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 ARHGEF6Q15052 776 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 SEPT14Q6ZU15 432 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 IGSF22Q8N9C0 903 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 HAS1Q92839 578 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 SLC5A5Q92911 643 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 LENG9Q96B70 501 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 DHX58Q96C10 678 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 TIGD1Q96MW7 591 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 INPP4AQ96PE3 977 aaPredicted RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 ZIC5Q96T25 663 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 NUDT12Q9BQG2 462 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 PANK2Q9BZ23 570 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 CCSER1Q9C0I3 900 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 NT5C3AQ9H0P0 336 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 CLSTN2Q9H4D0 955 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 AGO4Q9HCK5 861 aaKnown RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 PKD2L1Q9P0L9 805 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 HPSEQ9Y251 543 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
CCM2-204ENST00000470837 SAMM50Q9Y512 469 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 ADGRA2Q96PE1 1338 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 A0A0G2JMZ2 1700 aa10.98□□□□□ -0.65
CCM2-204ENST00000470837 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 FAM237AA0A1B0GTK4 181 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 POTEMA6NI47 508 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 CHMP2AO43633 222 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 EDIL3O43854 480 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
CCM2-204ENST00000470837 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
CCM2-204ENST00000470837 RGS2P41220 211 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 KRT76Q01546 638 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 IL17AQ16552 155 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 CAMK4Q16566 473 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
CCM2-204ENST00000470837 UIMC1Q96RL1 719 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 LRRC27Q9C0I9 530 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 CUEDC2Q9H467 287 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 MAGEF1Q9HAY2 307 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 DISC1Q9NRI5 854 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 RLFQ13129 1914 aa10.97□□□□□ -0.65
CCM2-204ENST00000470837 PP2D1A8MPX8 630 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.65
CCM2-204ENST00000470837 TRPA1O75762 1119 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 PSMD10O75832 226 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 SMC2O95347 1197 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 SLFN14P0C7P3 912 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 TGFB3P10600 412 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 EDNRBP24530 442 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 CDC25AP30304 524 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 SFNP31947 248 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 JAK3P52333 1124 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 AMPD3Q01432 767 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 MAP2K5Q13163 448 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 SNW1Q13573 536 aaKnown RBP10.96□□□□□ -0.65
CCM2-204ENST00000470837 NEDD9Q14511 834 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 KARSQ15046 597 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms