RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ITGB8P26012 769 aa16.23■□□□□ 0.19
TOP3B-215ENST00000470338 GNPTABQ3T906 1256 aa16.23■□□□□ 0.19
TOP3B-215ENST00000470338 DHX37Q8IY37 1157 aaKnown RBP16.23■□□□□ 0.19
TOP3B-215ENST00000470338 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
TOP3B-215ENST00000470338 PHKBQ93100 1093 aa16.23■□□□□ 0.19
TOP3B-215ENST00000470338 LARP6Q9BRS8 491 aaKnown RBP16.23■□□□□ 0.19
TOP3B-215ENST00000470338 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
TOP3B-215ENST00000470338 ESYT2A0FGR8 921 aa16.22■□□□□ 0.19
TOP3B-215ENST00000470338 GGPS1O95749 300 aa16.22■□□□□ 0.19
TOP3B-215ENST00000470338 FOSP01100 380 aaPredicted RBP16.22■□□□□ 0.19
TOP3B-215ENST00000470338 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
TOP3B-215ENST00000470338 UBA1P22314 1058 aaKnown RBP16.22■□□□□ 0.19
TOP3B-215ENST00000470338 CLK2P49760 499 aaKnown RBP16.22■□□□□ 0.19
TOP3B-215ENST00000470338 ADCY7P51828 1080 aa16.22■□□□□ 0.19
TOP3B-215ENST00000470338 SEMA3FQ13275 785 aa16.22■□□□□ 0.19
TOP3B-215ENST00000470338 DGKDQ16760 1214 aa16.22■□□□□ 0.19
TOP3B-215ENST00000470338 BADQ92934 168 aa16.22■□□□□ 0.19
TOP3B-215ENST00000470338 FIBPO43427 364 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 PPFIA4O75335 1185 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 TIMP1P01033 207 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 RAG1P15918 1043 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.19
TOP3B-215ENST00000470338 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.19
TOP3B-215ENST00000470338 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 C8orf34Q49A92 452 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 NLRX1Q86UT6 975 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 KAT2BQ92831 832 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 ZMYND12Q9H0C1 365 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 BCAS3Q9H6U6 928 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 EHMT1Q9H9B1 1298 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 UBIAD1Q9Y5Z9 338 aa16.21■□□□□ 0.19
TOP3B-215ENST00000470338 B4GALT4O60513 344 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 ITGB5P18084 799 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 PTPN11Q06124 597 aaPredicted RBP16.2■□□□□ 0.18
TOP3B-215ENST00000470338 AP3B2Q13367 1082 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 NEDD9Q14511 834 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 HSDL1Q3SXM5 330 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 TDHQ8IZJ6 230 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 CCDC12Q8WUD4 166 aaPredicted RBP16.2■□□□□ 0.18
TOP3B-215ENST00000470338 GPRASP2Q96D09 838 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 SPATA33Q96N06 139 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 TRPV6Q9H1D0 765 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
TOP3B-215ENST00000470338 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
TOP3B-215ENST00000470338 LAMA3Q16787 3333 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 MAFGO15525 162 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 AK2P54819 239 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 SSRP1Q08945 709 aaKnown RBP16.19■□□□□ 0.18
TOP3B-215ENST00000470338 STK3Q13188 491 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 CDHR1Q96JP9 859 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 ANO3Q9BYT9 981 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 SH3GLB2Q9NR46 395 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 TMEM260Q9NX78 707 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
TOP3B-215ENST00000470338 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
TOP3B-215ENST00000470338 HAS3O00219 553 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 CPLX1O14810 134 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 SORBS3O60504 671 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 PFKFB2O60825 505 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 GNA11P29992 359 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 SREBF1P36956 1147 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 SCRN1Q12765 414 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 MFSD5Q6N075 450 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 METTL7BQ6UX53 244 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 CYFIP1Q7L576 1253 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 SESTD1Q86VW0 696 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 TRIM22Q8IYM9 498 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 GIMAP8Q8ND71 665 aaPredicted RBP16.18■□□□□ 0.18
TOP3B-215ENST00000470338 PGBD1Q96JS3 809 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 JADE2Q9NQC1 790 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 KAT6AQ92794 2004 aa16.18■□□□□ 0.18
TOP3B-215ENST00000470338 ATP9AO75110 1047 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 F2P00734 622 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 SUPT20HL2P0C7V6 817 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 KCNA2P16389 499 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 LRIT3Q3SXY7 679 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 JAKMIP3Q5VZ66 844 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
TOP3B-215ENST00000470338 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 CRYGNQ8WXF5 182 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 C16orf70Q9BSU1 422 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 NOC4LQ9BVI4 516 aaKnown RBP16.17■□□□□ 0.18
TOP3B-215ENST00000470338 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
TOP3B-215ENST00000470338 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
TOP3B-215ENST00000470338 TRMT13Q9NUP7 481 aaKnown RBP16.17■□□□□ 0.18
TOP3B-215ENST00000470338 SZT2Q5T011 3432 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 DEXIO95424 95 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 CYP3A4P08684 503 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 PSEN2P49810 448 aa16.16■□□□□ 0.18
TOP3B-215ENST00000470338 NEK4P51957 841 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms