RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 GUCY2DQ02846 1103 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 NAB2Q15742 525 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 GLE1Q53GS7 698 aaKnown RBP11.37□□□□□ -0.59
SMC4-210ENST00000469762 TBC1D9BQ66K14 1250 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
SMC4-210ENST00000469762 GJA10Q969M2 543 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 DEF6Q9H4E7 631 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
SMC4-210ENST00000469762 A0A087X0T9 212 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 FAM228BP0C875 321 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 SV2BQ7L1I2 683 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 LARP4BQ92615 738 aaKnown RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 DDX12PQ92771 950 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 ALS2CR12Q96Q35 445 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 H0YGN5 161 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 ZEB2O60315 1214 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 TSPY3P0CV98 308 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 TSPY8P0CW00 308 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.592e-10■■■■■ 37.2
SMC4-210ENST00000469762 KCNQ4P56696 695 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 RPS8P62241 208 aaKnown RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 DNAAF5Q86Y56 855 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 CNPY4Q8N129 248 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 PRPF38AQ8NAV1 312 aaKnown RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 NOX5Q96PH1 765 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 PIGSQ96S52 555 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 YY1AP1Q9H869 796 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 PCDHA2Q9Y5H9 948 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 NFS1Q9Y697 457 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 MYH7BA7E2Y1 1941 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 ATXN2Q99700 1313 aaKnown RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 NHSQ6T4R5 1651 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 GRID2IPA4D2P6 1211 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 HSF2BPO75031 334 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 GUCY2FP51841 1108 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 SEC24CP53992 1094 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 LRRC63Q05C16 580 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 ITGB3BPQ13352 177 aaPredicted RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 FAM83BQ5T0W9 1011 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 RAD54LQ92698 747 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 LRRC4CQ9HCJ2 640 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 COL24A1Q17RW2 1714 aa11.36□□□□□ -0.59
SMC4-210ENST00000469762 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
SMC4-210ENST00000469762 MYO1FO00160 1098 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 RAD51CO43502 376 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 AMPD3Q01432 767 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 UAP1Q16222 522 aaPredicted RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 CFAP221Q4G0U5 840 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 NAA35Q5VZE5 725 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 KRT12Q99456 494 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 TNRC6CQ9HCJ0 1690 aaKnown RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 NOVP48745 357 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 EDEM3Q9BZQ6 932 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 NEUROG2Q9H2A3 272 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 MKNK2Q9HBH9 465 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 KCNQ2O43526 872 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 PAFAH1B1P43034 410 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 DNA2P51530 1060 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 NAP1L1P55209 391 aaKnown RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 RNASE9P60153 205 aaKnown RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
SMC4-210ENST00000469762 IFT81Q8WYA0 676 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 GOLPH3Q9H4A6 298 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 NDUFAB1O14561 156 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 ERVK-9P63128 1117 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 PTGISQ16647 500 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 SPRED3Q2MJR0 410 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 HAS1Q92839 578 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 EPN3Q9H201 632 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 CEP72Q9P209 647 aa11.35□□□□□ -0.59
SMC4-210ENST00000469762 FOXR2Q6PJQ5 311 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 C6orf89Q6UWU4 347 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 SYN2Q92777 582 aaPredicted RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 CCDC47Q96A33 483 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 CALML4Q96GE6 196 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 GANQ9H2C0 597 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 VAT1LQ9HCJ6 419 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 SERPING1P05155 500 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 INPP5BP32019 993 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 SLC18A3Q16572 532 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms