RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 PSD3Q9NYI0 1048 aa11.14□□□□□ -0.63
SEMA4D-215ENST00000469653 TPX2Q9ULW0 747 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-215ENST00000469653 PPP6R2O75170 966 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 ZMYND10O75800 440 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 ZNF18P17022 549 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 E2F5Q15329 346 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SPICE1Q8N0Z3 855 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 CCDC12Q8WUD4 166 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 PDE11AQ9HCR9 933 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 RSPH14Q9UHP6 348 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 KCNH4Q9UQ05 1017 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 C19orf81C9J6K1 198 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 F5H6K3 240 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 CXCL11O14625 94 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 N4BP1O75113 896 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SLC10A3P09131 477 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 METAP2P50579 478 aaKnown RBP eCLIP11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 KLRC3Q07444 240 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 TRIM29Q14134 588 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 KIAA1755Q5JYT7 1200 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 BEND6Q5SZJ8 279 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 CATIPQ7Z7H3 387 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 PNKPQ96T60 521 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 RASSF4Q9H2L5 321 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SLC12A7Q9Y666 1083 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 GOLGA6L9A6NEM1 432 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 RASSF10A6NK89 507 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 AFMP43652 599 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 USP14P54578 494 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SNAPC2Q13487 334 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 SRLQ86TD4 932 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 NFE2L3Q9Y4A8 694 aa11.13□□□□□ -0.63
SEMA4D-215ENST00000469653 BAZ2BQ9UIF8 2168 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 A0A0G2JLL6 359 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 SOWAHDA6NJG2 315 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 FAM155AB1AL88 458 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 CUTAO60888 179 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 NAT2P11245 290 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 KRT40Q6A162 431 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 PRRT2Q7Z6L0 340 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 BORCS6Q96GS4 357 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 NDUFB10O96000 172 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 ACTN2P35609 894 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 GTF2A2P52657 109 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 AKAP17AQ02040 695 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 SLFN13Q68D06 897 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 MAN1B1Q9UKM7 699 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 LOC285556D6RIA3 1793 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 CHMP4BP1P59074 171 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 GRIN1Q05586 938 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 BIRC2Q13490 618 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 BRD3Q15059 726 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 SH3D19Q5HYK7 790 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 CT47A1Q5JQC4 288 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 APOA5Q6Q788 366 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 VPS18Q9P253 973 aa11.12□□□□□ -0.63
SEMA4D-215ENST00000469653 HSPA6P17066 643 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 NAT1P18440 290 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 TROAPQ12815 778 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 RAD9BQ6WBX8 426 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 NUP88Q99567 741 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 KLF15Q9UIH9 416 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 RRP15Q9Y3B9 282 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 PDHBP11177 359 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 SLC1A4P43007 532 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 TTC19Q6DKK2 380 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 LPAR1Q92633 364 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 CAPNS2Q96L46 248 aa11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 KIAA1522Q9P206 1035 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-215ENST00000469653 ZBTB43O43298 467 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 CETPP11597 493 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 VCAM1P19320 739 aa11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 NOP2P46087 812 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-215ENST00000469653 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms