RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 MMP1P03956 469 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 COASYQ13057 564 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 PWP2Q15269 919 aaKnown RBP14.99□□□□□ -0.01
HDAC6-217ENST00000469223 PLEKHG4Q58EX7 1191 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 ADGRD2Q7Z7M1 963 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 ARHGAP45Q92619 1136 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 SYNPO2Q9UMS6 1093 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 ZFYVE26Q68DK2 2539 aa14.99□□□□□ -0.01
HDAC6-217ENST00000469223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-217ENST00000469223 GLP2RO95838 553 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 RB1P06400 928 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-217ENST00000469223 LINC00271P0C7V0 271 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 TRIM27P14373 513 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 CALML3P27482 149 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 SLC1A4P43007 532 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 PSEN2P49810 448 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 ZNF200P98182 395 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-217ENST00000469223 ATP8B2P98198 1209 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 KCTD1Q719H9 257 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 CHST3Q7LGC8 479 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 PRR12Q9ULL5 1215 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 CEP295Q9C0D2 2601 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 PLIN4Q96Q06 1357 aa14.98□□□□□ -0.01
HDAC6-217ENST00000469223 ADGRA3Q8IWK6 1321 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 SETXQ7Z333 2677 aaKnown RBP14.97□□□□□ -0.01
HDAC6-217ENST00000469223 ICAM1P05362 532 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 ZNF286BP0CG31 522 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 BMPR1AP36894 532 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 THPOP40225 353 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 ARHGAP1Q07960 439 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 EFHBQ8N7U6 833 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 SEPT8Q92599 483 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 PPP2R3CQ969Q6 453 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 IL17RAQ96F46 866 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 GMCL1Q96IK5 515 aa14.97□□□□□ -0.01
HDAC6-217ENST00000469223 GPR179Q6PRD1 2367 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 MINDY4BA8MYZ0 360 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 RSPH10B2B2RC85 870 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 RSPH10BP0C881 870 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 SP100P23497 879 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-217ENST00000469223 MCCP23508 829 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 EDNRBP24530 442 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 NRIP1P48552 1158 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 TTC3P53804 2025 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
HDAC6-217ENST00000469223 CAMK1Q14012 370 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 MFSD10Q14728 455 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
HDAC6-217ENST00000469223 CLUAP1Q96AJ1 413 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 IL1RAPL2Q9NP60 686 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 EXOC6BQ9Y2D4 811 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 RWDD3Q9Y3V2 267 aa14.96□□□□□ -0.01
HDAC6-217ENST00000469223 GH1P01241 217 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 CTSHP09668 335 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 CASTP20810 708 aaKnown RBP14.95□□□□□ -0.02
HDAC6-217ENST00000469223 HIC1Q14526 733 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 PUM1Q14671 1186 aaKnown RBP eCLIP14.95□□□□□ -0.02
HDAC6-217ENST00000469223 KIAA0753Q2KHM9 967 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 KIAA2013Q8IYS2 634 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 MPHOSPH6Q99547 160 aaKnown RBP14.95□□□□□ -0.02
HDAC6-217ENST00000469223 KATNAL1Q9BW62 490 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 OSBPL7Q9BZF2 842 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.95□□□□□ -0.026e-8■■■■□ 25.2
HDAC6-217ENST00000469223 PAG1Q9NWQ8 432 aa14.95□□□□□ -0.02
HDAC6-217ENST00000469223 F2P00734 622 aa14.94□□□□□ -0.02
HDAC6-217ENST00000469223 ATF7P17544 494 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-217ENST00000469223 DNAJB1P25685 340 aa14.94□□□□□ -0.02
HDAC6-217ENST00000469223 LY6KQ17RY6 165 aa14.94□□□□□ -0.02
HDAC6-217ENST00000469223 CCDC62Q6P9F0 684 aa14.94□□□□□ -0.02
HDAC6-217ENST00000469223 DHX37Q8IY37 1157 aaKnown RBP14.94□□□□□ -0.02
HDAC6-217ENST00000469223 KREMEN2Q8NCW0 462 aa14.94□□□□□ -0.02
HDAC6-217ENST00000469223 PUS7LQ9H0K6 701 aaKnown RBP14.94□□□□□ -0.02
HDAC6-217ENST00000469223 RC3H2Q9HBD1 1191 aaKnown RBP14.94□□□□□ -0.02
HDAC6-217ENST00000469223 MYH6P13533 1939 aa14.94□□□□□ -0.02
HDAC6-217ENST00000469223 FANCMQ8IYD8 2048 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 PLA2G6O60733 806 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 RBM10P98175 930 aaKnown RBP14.93□□□□□ -0.02
HDAC6-217ENST00000469223 DGKDQ16760 1214 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 ASTLQ6HA08 431 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-217ENST00000469223 RNF207Q6ZRF8 634 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 RBM23Q86U06 439 aaKnown RBP14.93□□□□□ -0.02
HDAC6-217ENST00000469223 SERINC5Q86VE9 423 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 ERC1Q8IUD2 1116 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-217ENST00000469223 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 SUSD6Q92537 303 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
HDAC6-217ENST00000469223 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
HDAC6-217ENST00000469223 MTMR7Q9Y216 660 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 PCDHGC5Q9Y5F6 944 aa14.93□□□□□ -0.02
HDAC6-217ENST00000469223 KAT6AQ92794 2004 aa14.92□□□□□ -0.02
HDAC6-217ENST00000469223 HAS3O00219 553 aa14.92□□□□□ -0.02
HDAC6-217ENST00000469223 BRD1O95696 1058 aa14.92□□□□□ -0.02
HDAC6-217ENST00000469223 RPS6P62753 249 aaKnown RBP14.92□□□□□ -0.02
HDAC6-217ENST00000469223 MTMR3Q13615 1198 aa14.92□□□□□ -0.02
HDAC6-217ENST00000469223 KCNG4Q8TDN1 519 aa14.92□□□□□ -0.02
HDAC6-217ENST00000469223 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-217ENST00000469223 BCL11AQ9H165 835 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms