RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TCEA2Q15560 299 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 LONRF2Q1L5Z9 754 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 TKFCQ3LXA3 575 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 C1QL4Q86Z23 238 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 KRTAP1-3Q8IUG1 177 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 ZSWIM2Q8NEG5 633 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 DCAF4Q8WV16 495 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 CDC6Q99741 560 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 RXFP1Q9HBX9 757 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 METTL14Q9HCE5 456 aaKnown RBP5.85□□□□□ -1.47
SMC4-208ENST00000467468 NPFFR2Q9Y5X5 522 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 X6R8D5 127 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 DGKIO75912 1065 aa5.84□□□□□ -1.47
SMC4-208ENST00000467468 FBLN1P23142 703 aa5.84□□□□□ -1.47
SMC4-208ENST00000467468 ZC3H12BQ5HYM0 836 aaKnown RBP5.84□□□□□ -1.47
SMC4-208ENST00000467468 AMIGO3Q86WK7 504 aa5.84□□□□□ -1.47
SMC4-208ENST00000467468 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
SMC4-208ENST00000467468 CLDND1Q9NY35 253 aa5.84□□□□□ -1.47
SMC4-208ENST00000467468 PLAAQ9Y263 795 aa5.84□□□□□ -1.47
SMC4-208ENST00000467468 HCFC2Q9Y5Z7 792 aa5.84□□□□□ -1.47
SMC4-208ENST00000467468 MAFKO60675 156 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 ASGR2P07307 311 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 VIL1P09327 827 aaKnown RBP5.83□□□□□ -1.48
SMC4-208ENST00000467468 IGFBP6P24592 240 aaPredicted RBP5.83□□□□□ -1.48
SMC4-208ENST00000467468 PMLP29590 882 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 MASP1P48740 699 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 AFF3P51826 1226 aaKnown RBP5.83□□□□□ -1.48
SMC4-208ENST00000467468 AMPD3Q01432 767 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 DENND5AQ6IQ26 1287 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 NLRP10Q86W26 655 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 FAM129CQ86XR2 697 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 SCUBE1Q8IWY4 988 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 CPA5Q8WXQ8 436 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 DDX11Q96FC9 970 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 YIPF4Q9BSR8 244 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 PHF20Q9BVI0 1012 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 EPB41L1Q9H4G0 881 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 PCDH18Q9HCL0 1135 aa5.83□□□□□ -1.48
SMC4-208ENST00000467468 ADCY3O60266 1144 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 ASMTLO95671 621 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 APPP05067 770 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 FAM153BP0C7A2 387 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 LCP1P13796 627 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 SUMO1P63165 101 aaKnown RBP5.82□□□□□ -1.48
SMC4-208ENST00000467468 KIZQ2M2Z5 673 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 ETV3LQ6ZN32 361 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 B3GNT8Q7Z7M8 397 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 ZC3H18Q86VM9 953 aaKnown RBP5.82□□□□□ -1.48
SMC4-208ENST00000467468 TMEFF1Q8IYR6 380 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 ZBTB38Q8NAP3 1195 aaPredicted RBP5.82□□□□□ -1.48
SMC4-208ENST00000467468 PWWP2AQ96N64 755 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 NGRNQ9NPE2 291 aaKnown RBP5.82□□□□□ -1.48
SMC4-208ENST00000467468 ZNF652Q9Y2D9 606 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 SIT1Q9Y3P8 196 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 PMF1-BGLAPU3KQ54 211 aa5.82□□□□□ -1.48
SMC4-208ENST00000467468 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 CCDC163A0A0D9SF12 145 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 ARNTLO00327 626 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 KRIT1O00522 736 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 HGSO14964 777 aaPredicted RBP5.81□□□□□ -1.48
SMC4-208ENST00000467468 MARCH6O60337 910 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 LIMS1P48059 325 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 GPR85P60893 370 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 FOXO4P98177 505 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 CAP1Q01518 475 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 CACNB2Q08289 660 aaPredicted RBP5.81□□□□□ -1.48
SMC4-208ENST00000467468 DALRD3Q5D0E6 543 aaKnown RBP5.81□□□□□ -1.48
SMC4-208ENST00000467468 STEAP3Q658P3 488 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 STYK1Q6J9G0 422 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 LCNL1Q6ZST4 164 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 MAMDC2Q7Z304 686 aaPredicted RBP5.81□□□□□ -1.48
SMC4-208ENST00000467468 KRT26Q7Z3Y9 468 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 MILR1Q7Z6M3 343 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 IFNL3Q8IZI9 196 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.81□□□□□ -1.482e-6■■■■■ 54.3
SMC4-208ENST00000467468 DACT3Q96B18 629 aaPredicted RBP5.81□□□□□ -1.48
SMC4-208ENST00000467468 FBXL7Q9UJT9 491 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 PALD1Q9ULE6 856 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 NUB1Q9Y5A7 615 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 CD2APQ9Y5K6 639 aa5.81□□□□□ -1.48
SMC4-208ENST00000467468 AQP7O14520 342 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 SGSM2O43147 1006 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 CYP2C8P10632 490 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 NAT1P18440 290 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 EMC4Q5J8M3 183 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 YOD1Q5VVQ6 348 aaPredicted RBP5.8□□□□□ -1.48
SMC4-208ENST00000467468 LBX2Q6XYB7 198 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 SPOCD1Q6ZMY3 1216 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 FAM126BQ8IXS8 530 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 PHOSPHO1Q8TCT1 267 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 PANK1Q8TE04 598 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 ALG1Q9BT22 464 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 BCAS3Q9H6U6 928 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 TYW1Q9NV66 732 aaKnown RBP5.8□□□□□ -1.48
SMC4-208ENST00000467468 KLHL42Q9P2K6 505 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 PCDHB4Q9Y5E5 795 aa5.8□□□□□ -1.48
SMC4-208ENST00000467468 ATF2P15336 505 aa5.79□□□□□ -1.48
SMC4-208ENST00000467468 GRK2P25098 689 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms