RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TNNI2P48788 182 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 PPIL2Q13356 520 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 ZNF792Q3KQV3 632 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 CFAP100Q494V2 611 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 C8orf34Q49A92 452 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
PTCD3-207ENST00000467273 ZNF574Q6ZN55 896 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-207ENST00000467273 C15orf52Q6ZUT6 534 aaKnown RBP6.93□□□□□ -1.3
PTCD3-207ENST00000467273 NECAB2Q7Z6G3 386 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 KSR1Q8IVT5 923 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 VEZTQ9HBM0 779 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 IGSF5Q9NSI5 407 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 CWC25Q9NXE8 425 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-207ENST00000467273 SLC5A6Q9Y289 635 aa6.93□□□□□ -1.3
PTCD3-207ENST00000467273 ALPK3Q96L96 1907 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 CLRN2A0PK11 232 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 BTBD19C9JJ37 291 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 CHL1O00533 1208 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 IL1R1P14778 569 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 RAB6AP20340 208 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 FCGRTP55899 365 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 ORC1Q13415 861 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 Q7L0L9 218 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 ZNF765Q7L2R6 523 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 ANKRD23Q86SG2 305 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 DHX37Q8IY37 1157 aaKnown RBP6.92□□□□□ -1.3
PTCD3-207ENST00000467273 TTLL11Q8NHH1 800 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 PRMT6Q96LA8 375 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-207ENST00000467273 TEPSINQ96N21 525 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 CD209Q9NNX6 404 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 SPEF2Q9C093 1822 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 MGAMO43451 1857 aa6.92□□□□□ -1.3
PTCD3-207ENST00000467273 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-207ENST00000467273 PNMA6FA0A0J9YX94 578 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 TFRCP02786 760 aaKnown RBP6.91□□□□□ -1.3
PTCD3-207ENST00000467273 CTGFP29279 349 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 IGHMBP2P38935 993 aaKnown RBP6.91□□□□□ -1.3
PTCD3-207ENST00000467273 RIPK4P57078 832 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 PPATQ06203 517 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 ZNF804AQ7Z570 1209 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 CERS5Q8N5B7 392 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 C1orf127Q8N9H9 656 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 FAM161BQ96MY7 647 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
PTCD3-207ENST00000467273 TTC28Q96AY4 2481 aa6.91□□□□□ -1.3
PTCD3-207ENST00000467273 ADCY3O60266 1144 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 DDX58O95786 925 aaKnown RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 VAMP1P23763 118 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 MAGEA10P43363 369 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 KCNJ4P48050 445 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 CYP27A1Q02318 531 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 PRKCZQ05513 592 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 SOX4Q06945 474 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 CNGB1Q14028 1251 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 ENOX2Q16206 610 aaKnown RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 EXOSC6Q5RKV6 272 aaKnown RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 FKBP1CQ5VVH2 108 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 TTC16Q8NEE8 873 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 BCL7CQ8WUZ0 217 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 FAM168AQ92567 244 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 EZH1Q92800 747 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 GATA6Q92908 595 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 PAWRQ96IZ0 340 aaKnown RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 DEFB118Q96PH6 123 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 PARK7Q99497 189 aaKnown RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 MPHOSPH8Q99549 860 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 GREM2Q9H772 168 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 ZNF70Q9UC06 446 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-207ENST00000467273 PARP2Q9UGN5 583 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.3
PTCD3-207ENST00000467273 PDHXO00330 501 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
PTCD3-207ENST00000467273 RECKO95980 971 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 RPLP1P05386 114 aaKnown RBP6.89□□□□□ -1.31
PTCD3-207ENST00000467273 NFICP08651 508 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 PLA2G5P39877 138 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 RBM5P52756 815 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTCD3-207ENST00000467273 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
PTCD3-207ENST00000467273 ATP2B2Q01814 1243 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 FAM83AQ86UY5 434 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 MYD88Q99836 296 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 PLA2G12BQ9BX93 195 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 CPA4Q9UI42 421 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 IRS2Q9Y4H2 1338 aa6.89□□□□□ -1.31
PTCD3-207ENST00000467273 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-207ENST00000467273 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 ADH5P11766 374 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 KLRK1P26718 216 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 TMPOP42166 694 aaKnown RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 GSTM4Q03013 218 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
PTCD3-207ENST00000467273 MAP7Q14244 749 aa6.88□□□□□ -1.31
PTCD3-207ENST00000467273 TSNAXIP1Q2TAA8 658 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms