RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ERCC3P19447 782 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
HPS1-208ENST00000467246 COASYQ13057 564 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 WDR59Q6PJI9 974 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 LENG9Q96B70 501 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 DNAJC7Q99615 494 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 FGFBP2Q9BYJ0 223 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 LRRC27Q9C0I9 530 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 NT5C3AQ9H0P0 336 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 HDAC9Q9UKV0 1011 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 PLA2G4BP0C869 781 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 STAT2P52630 851 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 SPIRE1Q08AE8 756 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 RAD51AP2Q09MP3 1159 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 FAM83BQ5T0W9 1011 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 MOXD1Q6UVY6 613 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 TTYH3Q9C0H2 523 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 PANK4Q9NVE7 773 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 TBC1D7Q9P0N9 293 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 TMX2Q9Y320 296 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 UTRNP46939 3433 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 KDM3AQ9Y4C1 1321 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
HPS1-208ENST00000467246 SREBF1P36956 1147 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 MMP14P50281 582 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
HPS1-208ENST00000467246 FBXO38Q6PIJ6 1188 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 SLFN12Q8IYM2 578 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 ST7Q9NRC1 585 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
HPS1-208ENST00000467246 SCAF8Q9UPN6 1271 aaKnown RBP12.72□□□□□ -0.37
HPS1-208ENST00000467246 EPN1Q9Y6I3 576 aaPredicted RBP12.72□□□□□ -0.37
HPS1-208ENST00000467246 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
HPS1-208ENST00000467246 PSMD2Q13200 908 aa12.71□□□□□ -0.37
HPS1-208ENST00000467246 CATSPER3Q86XQ3 398 aa12.71□□□□□ -0.37
HPS1-208ENST00000467246 MNS1Q8NEH6 495 aa12.71□□□□□ -0.37
HPS1-208ENST00000467246 PCMTD1Q96MG8 357 aaPredicted RBP12.71□□□□□ -0.37
HPS1-208ENST00000467246 TMEM51Q9NW97 253 aa12.71□□□□□ -0.37
HPS1-208ENST00000467246 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
HPS1-208ENST00000467246 MRFAP1Q9Y605 127 aa12.71□□□□□ -0.37
HPS1-208ENST00000467246 MEIS1O00470 390 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 KIF5CO60282 957 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.38
HPS1-208ENST00000467246 ARHGAP25P42331 645 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 PSMC6P62333 389 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 Q4G0T1 1027 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 ZNF569Q5MCW4 686 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 NCAPH2Q6IBW4 605 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 LRRC55Q6ZSA7 311 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 GPBP1Q86WP2 473 aa12.71□□□□□ -0.38
HPS1-208ENST00000467246 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.38
HPS1-208ENST00000467246 NDUFA10O95299 355 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 CYP11B2P19099 503 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 FAM26FQ5R3K3 315 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
HPS1-208ENST00000467246 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
HPS1-208ENST00000467246 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 ZNF397Q8NF99 534 aaPredicted RBP12.7□□□□□ -0.38
HPS1-208ENST00000467246 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
HPS1-208ENST00000467246 MSH4O15457 936 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 TADA3O75528 432 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 VWA3BQ502W6 1294 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 SLC30A10Q6XR72 485 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 NDST4Q9H3R1 872 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
HPS1-208ENST00000467246 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 CFBP00751 764 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 SLC12A3P55017 1021 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
HPS1-208ENST00000467246 NBPF9Q3BBW0 867 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 FKBP15Q5T1M5 1219 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 MCTP2Q6DN12 878 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 UBXN4Q92575 508 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 TRIM10Q9UDY6 481 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 PCDHA2Q9Y5H9 948 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 TBX3O15119 743 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 CIITAP33076 1130 aa12.69□□□□□ -0.38
HPS1-208ENST00000467246 ZNF76P36508 570 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms