RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MYO1BO43795 1136 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 DDAH1O94760 285 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 LSAMPQ13449 338 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 CD300LDQ6UXZ3 194 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 TTLL7Q6ZT98 887 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 EEPD1Q7L9B9 569 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 STK32CQ86UX6 486 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 ZC3H18Q86VM9 953 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 TTLL6Q8N841 843 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 ARRDC4Q8NCT1 418 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 DDX1Q92499 740 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 MBD6Q96DN6 1003 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 TRMT2BQ96GJ1 504 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 CCDC140Q96MF4 163 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 GMLQ99445 158 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 IGSF5Q9NSI5 407 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 PCDHB4Q9Y5E5 795 aa5.02□□□□□ -1.61
GTF3C3-209ENST00000466862 KLF4O43474 513 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 MSCO60682 206 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 DDR2Q16832 855 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 RGL3Q3MIN7 710 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 TBC1D10BQ4KMP7 808 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 STEAP3Q658P3 488 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 TEPPQ6URK8 271 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 PROSER1Q86XN7 944 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 ZCCHC14Q8WYQ9 949 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 ZNF428Q96B54 188 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 EPB41L1Q9H4G0 881 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 HSPBP1Q9NZL4 362 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 LRP2BPQ9P2M1 347 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 PCDHA2Q9Y5H9 948 aa5.01□□□□□ -1.61
GTF3C3-209ENST00000466862 DLX3O60479 287 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 PLATP00750 562 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 LRG1P02750 347 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 MAGEA10P43363 369 aaPredicted RBP5□□□□□ -1.61
GTF3C3-209ENST00000466862 KCNJ6P48051 423 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 ADAM17P78536 824 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 CHRNA2Q15822 529 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 VPS37DQ86XT2 251 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 TTC9BQ8N6N2 239 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 TXNDC5Q8NBS9 432 aaKnown RBP5□□□□□ -1.61
GTF3C3-209ENST00000466862 TTLL11Q8NHH1 800 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 YTHDC1Q96MU7 727 aaKnown RBP5□□□□□ -1.61
GTF3C3-209ENST00000466862 NGRNQ9NPE2 291 aaKnown RBP5□□□□□ -1.61
GTF3C3-209ENST00000466862 ARHGEF4Q9NR80 690 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 CLDND1Q9NY35 253 aa5□□□□□ -1.61
GTF3C3-209ENST00000466862 PPARGC1AQ9UBK2 798 aaKnown RBP5□□□□□ -1.61
GTF3C3-209ENST00000466862 COA3Q9Y2R0 106 aaPredicted RBP5□□□□□ -1.61
GTF3C3-209ENST00000466862 MROH6A6NGR9 719 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 HGSO14964 777 aaPredicted RBP4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 B4GALT3O60512 393 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 COL6A1P12109 1028 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 ARID5AQ03989 594 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 NTRK3Q16288 839 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 HABP4Q5JVS0 413 aaKnown RBP4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 CYP4F22Q6NT55 531 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 PKN3Q6P5Z2 889 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 SLC43A3Q8NBI5 491 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 PHOSPHO1Q8TCT1 267 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 KCTD13Q8WZ19 329 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 TOE1Q96GM8 510 aaKnown RBP4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 ZSWIM3Q96MP5 696 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 IER2Q9BTL4 223 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 GPR27Q9NS67 375 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 MYOTQ9UBF9 498 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 ASH2LQ9UBL3 628 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 INVSQ9Y283 1065 aa4.99□□□□□ -1.61
GTF3C3-209ENST00000466862 NKX3-2P78367 333 aa4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 GNL2Q13823 731 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 ZNF827Q17R98 1081 aa4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 MCTP2Q6DN12 878 aa4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 BORCS6Q96GS4 357 aa4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 C1QTNF3Q9BXJ4 246 aa4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 PDGFDQ9GZP0 370 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-209ENST00000466862 C1QTNF3-AMACRE9PGA6 284 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 DGKIO75912 1065 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 TNFRSF1AP19438 455 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 MLLT6P55198 1093 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 RSPO2Q6UXX9 243 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 ANKS3Q6ZW76 656 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 LGI4Q8N135 537 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 OSBP2Q969R2 916 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 SGSM3Q96HU1 749 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 SAMD11Q96NU1 681 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 TMEM209Q96SK2 561 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 PHF20Q9BVI0 1012 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 TMPRSS5Q9H3S3 457 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 SMOC1Q9H4F8 434 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 SLC6A20Q9NP91 592 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 SMPD4Q9NXE4 827 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 RBPJLQ9UBG7 517 aa4.97□□□□□ -1.61
GTF3C3-209ENST00000466862 FGFR1P11362 822 aa4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 DNAJA1P31689 397 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 DTX3Q8N9I9 347 aa4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 UHMK1Q8TAS1 419 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 PIP4K2CQ8TBX8 421 aa4.96□□□□□ -1.62
GTF3C3-209ENST00000466862 YIPF4Q9BSR8 244 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms