RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 PCNX4Q63HM2 1172 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 TDHQ8IZJ6 230 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 LRCH3Q96II8 777 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 SPATA33Q96N06 139 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 RIC8AQ9NPQ8 531 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
CD40-204ENST00000466205 NID2Q14112 1375 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 CPLX1O14810 134 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 KIAA0355O15063 1070 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 CD4P01730 458 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 CYP2C18P33260 490 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 BMP8BP34820 402 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 EPHB4P54760 987 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 AK2P54819 239 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 CCL23P55773 120 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 LAMC2Q13753 1193 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 SHHQ15465 462 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 C9orf50Q5SZB4 431 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 CELF3Q5SZQ8 465 aaKnown RBP11.67□□□□□ -0.54
CD40-204ENST00000466205 MYSM1Q5VVJ2 828 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 CYFIP1Q7L576 1253 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 SLC43A3Q8NBI5 491 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 TOX2Q96NM4 488 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 UIMC1Q96RL1 719 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 ANO3Q9BYT9 981 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 ALDH8A1Q9H2A2 487 aaPredicted RBP11.67□□□□□ -0.54
CD40-204ENST00000466205 TBX21Q9UL17 535 aa11.67□□□□□ -0.54
CD40-204ENST00000466205 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 hCG_1984214I3L0E3 225 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 NOP56O00567 594 aaKnown RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 PRPF3O43395 683 aaKnown RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 FIBPO43427 364 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 ATP9AO75110 1047 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 TIMP1P01033 207 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 ACRP10323 421 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 ITGB5P18084 799 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 EVCP57679 992 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 SSRP1Q08945 709 aaKnown RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 SCRN1Q12765 414 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 DGKDQ16760 1214 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 C8orf34Q49A92 452 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 UTP14CQ5TAP6 766 aaKnown RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 KCNV1Q6PIU1 500 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 NLRX1Q86UT6 975 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 ZNF713Q8N859 430 aaPredicted RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 PPTC7Q8NI37 304 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 CYP2W1Q8TAV3 490 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 KAT2BQ92831 832 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 AIFM3Q96NN9 605 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 INPP4AQ96PE3 977 aaPredicted RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 SLKQ9H2G2 1235 aaPredicted RBP11.66□□□□□ -0.54
CD40-204ENST00000466205 HIPK3Q9H422 1215 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 TPCN1Q9ULQ1 816 aa11.66□□□□□ -0.54
CD40-204ENST00000466205 KPNA6O60684 536 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 STAM2O75886 525 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 LARGE1O95461 756 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 CSF2RAP15509 400 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 IFNAR1P17181 557 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 ICAM3P32942 547 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
CD40-204ENST00000466205 PSEN2P49810 448 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 ANAPC15P60006 121 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 FPGSQ05932 587 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 MTMR1Q13613 665 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 MFSD10Q14728 455 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 GDF6Q6KF10 455 aaPredicted RBP11.65□□□□□ -0.54
CD40-204ENST00000466205 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 NECAB1Q8N987 351 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
CD40-204ENST00000466205 ZNF274Q96GC6 653 aaPredicted RBP11.65□□□□□ -0.54
CD40-204ENST00000466205 SCLYQ96I15 445 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 RNF26Q9BY78 433 aaPredicted RBP11.65□□□□□ -0.54
CD40-204ENST00000466205 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 DOCK5Q9H7D0 1870 aa11.65□□□□□ -0.54
CD40-204ENST00000466205 DNAH12Q6ZR08 3092 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 DDX39AO00148 427 aaKnown RBP11.64□□□□□ -0.55
CD40-204ENST00000466205 TGFB3P10600 412 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 ZNF76P36508 570 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 NEK4P51957 841 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 NLRP5P59047 1200 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
CD40-204ENST00000466205 NEDD9Q14511 834 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 KIAA0753Q2KHM9 967 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 METTL7BQ6UX53 244 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 C7orf31Q8N865 590 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 C6orf50Q9HD87 102 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 JADE2Q9NQC1 790 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 HDAC6Q9UBN7 1215 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 UBIAD1Q9Y5Z9 338 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 MYH7BA7E2Y1 1941 aa11.64□□□□□ -0.55
CD40-204ENST00000466205 A0A1W2PPC1 479 aa11.63□□□□□ -0.55
CD40-204ENST00000466205 F2P00734 622 aa11.63□□□□□ -0.55
CD40-204ENST00000466205 LGALS2P05162 132 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms