RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 HOMEZQ8IX15 550 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 CELF1Q92879 486 aaKnown RBP6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 NMRK2Q9NPI5 230 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 LMCD1Q9NZU5 365 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 ST14Q9Y5Y6 855 aa6.13□□□□□ -1.43
EXOSC3-204ENST00000465860 H3BS24 57 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 ZNF646O15015 1829 aaPredicted RBP6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 TFE3P19532 575 aaPredicted RBP6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 SCN9AQ15858 1988 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 HSP90AB3PQ58FF7 597 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 SND1Q7KZF4 910 aaKnown RBP eCLIP6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 ZSWIM9Q86XI8 627 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 SH3TC1Q8TE82 1336 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 RPGRQ92834 1020 aaKnown RBP6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 WDR90Q96KV7 1748 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 CRAMP1Q96RY5 1269 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 BCL2L13Q9BXK5 485 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 STK31Q9BXU1 1019 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 MIR1-1HGQ9H1L0 117 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 MYH16Q9H6N6 1097 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 ZNF277Q9NRM2 450 aaPredicted RBP6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 LTBP3Q9NS15 1303 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 TJP2Q9UDY2 1190 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 TACC3Q9Y6A5 838 aa6.12□□□□□ -1.43
EXOSC3-204ENST00000465860 RNF123Q5XPI4 1314 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 ZNF541Q9H0D2 1346 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 ZNF503-AS2A6NEH8 195 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 IRS4O14654 1257 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 CBX7O95931 251 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 PCCAP05165 728 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 ALDH1B1P30837 517 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 CASP7P55210 303 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 KCNMB1Q16558 191 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 FYB2Q5VWT5 728 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 CDH24Q86UP0 819 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 ZBTB38Q8NAP3 1195 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 CCDC191Q8NCU4 936 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 SSH1Q8WYL5 1049 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 RBM17Q96I25 401 aaKnown RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 GPR101Q96P66 508 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 DPH2Q9BQC3 489 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 CWC25Q9NXE8 425 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 PARP2Q9UGN5 583 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 TLR6Q9Y2C9 796 aa6.11□□□□□ -1.43
EXOSC3-204ENST00000465860 PCNTO95613 3336 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 E9PSI1 815 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 DDX58O95786 925 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 PGRP06401 933 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 C1QTNF8P60827 252 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 DAB2P98082 770 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 GCKRQ14397 625 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 SF3B3Q15393 1217 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 CCDC93Q567U6 631 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 EPHA10Q5JZY3 1008 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 BEND3Q5T5X7 828 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 UBE3BQ7Z3V4 1068 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 NPAS4Q8IUM7 802 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 DNAAF4Q8WXU2 420 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 TMEM87BQ96K49 555 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 TNNQ9UQP3 1299 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 ATP6V0A2Q9Y487 856 aa6.1□□□□□ -1.43
EXOSC3-204ENST00000465860 SCN4AP35499 1836 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 PSME4Q14997 1843 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 ADAMTSL1Q8N6G6 1762 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 CDHR2Q9BYE9 1310 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 GLTPD2A6NH11 291 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 LRRC10BA6NIK2 292 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 PDE8AO60658 829 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 DDNO94850 711 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 CTSHP09668 335 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 GPSM2P81274 684 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 FOXO4P98177 505 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 RPL6Q02878 288 aaKnown RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 TNK2Q07912 1038 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 MESP2Q0VG99 397 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 PSMD2Q13200 908 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 GRAPQ13588 217 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 SLC6A19Q695T7 634 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 DNAJC14Q6Y2X3 702 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 DDX46Q7L014 1031 aaKnown RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 THAP5Q7Z6K1 395 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 SP8Q8IXZ3 490 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 TTLL11Q8NHH1 800 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 GRAPLQ8TC17 118 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 ACSF2Q96CM8 615 aaPredicted RBP6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 KAZALD1Q96I82 304 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 PSMD1Q99460 953 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 GREM2Q9H772 168 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 KCNQ5Q9NR82 932 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 POLLQ9UGP5 575 aa6.09□□□□□ -1.43
EXOSC3-204ENST00000465860 YDJCA8MPS7 323 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms