RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 DDX3XO00571 662 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMC4-205ENST00000465563 LCP1P13796 627 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 MAGEA10P43363 369 aaPredicted RBP8.37□□□□□ -1.07
SMC4-205ENST00000465563 PRR31Q5SQ13 230 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 BORAQ6PGQ7 559 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 LGI4Q8N135 537 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 RBM15Q96T37 977 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMC4-205ENST00000465563 EPN3Q9H201 632 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 CLDND1Q9NY35 253 aa8.37□□□□□ -1.07
SMC4-205ENST00000465563 GJB6O95452 261 aa8.36□□□□□ -1.07
SMC4-205ENST00000465563 PLATP00750 562 aa8.36□□□□□ -1.07
SMC4-205ENST00000465563 STEAP3Q658P3 488 aa8.36□□□□□ -1.07
SMC4-205ENST00000465563 TXNDC5Q8NBS9 432 aaKnown RBP8.36□□□□□ -1.07
SMC4-205ENST00000465563 TOE1Q96GM8 510 aaKnown RBP8.36□□□□□ -1.07
SMC4-205ENST00000465563 SMPD4Q9NXE4 827 aa8.36□□□□□ -1.07
SMC4-205ENST00000465563 PCDHB4Q9Y5E5 795 aa8.36□□□□□ -1.07
SMC4-205ENST00000465563 DGKIO75912 1065 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 INSRRP14616 1297 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 TBC1D10BQ4KMP7 808 aaPredicted RBP8.35□□□□□ -1.07
SMC4-205ENST00000465563 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 ARRDC4Q8NCT1 418 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 C1orf159Q96HA4 380 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 EPB41L1Q9H4G0 881 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 ZNF408Q9H9D4 720 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 INVSQ9Y283 1065 aa8.35□□□□□ -1.07
SMC4-205ENST00000465563 TCRBV5S2A0A599 114 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 TADA3O75528 432 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 CAPNS1P04632 268 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 FGRP09769 529 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 TCF3P15923 654 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 ARID5AQ03989 594 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 ADAM9Q13443 819 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 SLC10A6Q3KNW5 377 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 EMC4Q5J8M3 183 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 PRAMEF18Q5VWM3 479 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMC4-205ENST00000465563 LCORQ96JN0 433 aaPredicted RBP8.34□□□□□ -1.07
SMC4-205ENST00000465563 DTLQ9NZJ0 730 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 MYRFQ9Y2G1 1151 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 R3HCC1Q9Y3T6 440 aaKnown RBP8.34□□□□□ -1.07
SMC4-205ENST00000465563 NPFFR2Q9Y5X5 522 aa8.34□□□□□ -1.07
SMC4-205ENST00000465563 PPP2R2AP63151 447 aa8.33□□□□□ -1.08
SMC4-205ENST00000465563 MAP4K2Q12851 820 aa8.33□□□□□ -1.08
SMC4-205ENST00000465563 KCTD13Q8WZ19 329 aa8.33□□□□□ -1.08
SMC4-205ENST00000465563 CLIC6Q96NY7 704 aa8.33□□□□□ -1.08
SMC4-205ENST00000465563 C9orf118A6NHY6 69 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 MAFKO60675 156 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 ZNF28P17035 718 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 GRIA2P42262 883 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 ADAM17P78536 824 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 PUM1Q14671 1186 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMC4-205ENST00000465563 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 PHOSPHO1Q8TCT1 267 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 LOXL4Q96JB6 756 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 SAMD11Q96NU1 681 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 MYOTQ9UBF9 498 aa8.32□□□□□ -1.08
SMC4-205ENST00000465563 ZNF536O15090 1300 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 A0A1W2PQU0 124 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 CYP7B1O75881 506 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 CYP1A1P04798 512 aaPredicted RBP8.31□□□□□ -1.08
SMC4-205ENST00000465563 MCF2L2Q86YR7 1114 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 TINF2Q9BSI4 451 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 SMOC1Q9H4F8 434 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 L2HGDHQ9H9P8 463 aa8.31□□□□□ -1.08
SMC4-205ENST00000465563 LRG1P02750 347 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 IL13P35225 146 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 TTC9BQ8N6N2 239 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 ZSWIM3Q96MP5 696 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 WRNIP1Q96S55 665 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 TMEM209Q96SK2 561 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 IER2Q9BTL4 223 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 ST7Q9NRC1 585 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 GPR27Q9NS67 375 aa8.3□□□□□ -1.08
SMC4-205ENST00000465563 KRIT1O00522 736 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 SURF1Q15526 300 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 CPZQ66K79 652 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 GLB1LQ6UWU2 654 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 TMEM168Q9H0V1 697 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 CROTQ9UKG9 612 aa8.29□□□□□ -1.08
SMC4-205ENST00000465563 DLX3O60479 287 aa8.28□□□□□ -1.08
SMC4-205ENST00000465563 DNAJA1P31689 397 aaKnown RBP8.28□□□□□ -1.08
SMC4-205ENST00000465563 MLLT6P55198 1093 aaPredicted RBP8.28□□□□□ -1.08
SMC4-205ENST00000465563 CYP4F22Q6NT55 531 aa8.28□□□□□ -1.08
SMC4-205ENST00000465563 PLEKHH3Q7Z736 793 aa8.28□□□□□ -1.08
SMC4-205ENST00000465563 TRIM48Q8IWZ4 208 aa8.28□□□□□ -1.08
SMC4-205ENST00000465563 HNRNPLLQ8WVV9 542 aaKnown RBP8.28□□□□□ -1.08
SMC4-205ENST00000465563 YTHDC1Q96MU7 727 aaKnown RBP8.28□□□□□ -1.08
SMC4-205ENST00000465563 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
SMC4-205ENST00000465563 ASH2LQ9UBL3 628 aa8.28□□□□□ -1.08
SMC4-205ENST00000465563 B4GALT3O60512 393 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 HSP90AA2PQ14568 343 aaPredicted RBP8.27□□□□□ -1.09
SMC4-205ENST00000465563 RSPO2Q6UXX9 243 aaPredicted RBP8.27□□□□□ -1.09
SMC4-205ENST00000465563 ANKS3Q6ZW76 656 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 USP53Q70EK8 1073 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 CELF2-AS1Q8N7Q2 184 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 CHST13Q8NET6 341 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 SGSM3Q96HU1 749 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms