RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ACTR10Q9NZ32 417 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 LRP2BPQ9P2M1 347 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 FBXL7Q9UJT9 491 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 INVSQ9Y283 1065 aa4.68□□□□□ -1.66
SNX4-202ENST00000465505 H7BY64 318 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 HGSO14964 777 aaPredicted RBP4.67□□□□□ -1.66
SNX4-202ENST00000465505 MEFVO15553 781 aaPredicted RBP4.67□□□□□ -1.66
SNX4-202ENST00000465505 MYO1BO43795 1136 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 TADA3O75528 432 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 CENPBP07199 599 aaPredicted RBP4.67□□□□□ -1.66
SNX4-202ENST00000465505 LCP1P13796 627 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 ETFBP38117 255 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 GFRA1P56159 465 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 NKX3-2P78367 333 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 LSAMPQ13449 338 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 TNNI3KQ59H18 835 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 LARP1BQ659C4 914 aaKnown RBP4.67□□□□□ -1.66
SNX4-202ENST00000465505 MRM1Q6IN84 353 aaKnown RBP4.67□□□□□ -1.66
SNX4-202ENST00000465505 VPS37DQ86XT2 251 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 LGI4Q8N135 537 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 SSBP3Q9BWW4 388 aaPredicted RBP4.67□□□□□ -1.66
SNX4-202ENST00000465505 CAPN10Q9HC96 672 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 SMPD4Q9NXE4 827 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 PRKAG3Q9UGI9 489 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 ZNF652Q9Y2D9 606 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 PCDHA2Q9Y5H9 948 aa4.67□□□□□ -1.66
SNX4-202ENST00000465505 TCRBV5S2A0A599 114 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 DDAH1O94760 285 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 SSBP05455 408 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNX4-202ENST00000465505 LTBRP36941 435 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 PUM1Q14671 1186 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNX4-202ENST00000465505 FXNQ16595 210 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 SLC35F1Q5T1Q4 408 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 FAM124AQ86V42 546 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 PPIL6Q8IXY8 311 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 TMEM145Q8NBT3 493 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 C1orf159Q96HA4 380 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 SAMD11Q96NU1 681 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 C1QTNF3Q9BXJ4 246 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 CDIP1Q9H305 208 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 NPFFR2Q9Y5X5 522 aa4.66□□□□□ -1.66
SNX4-202ENST00000465505 ZNF28P17035 718 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 IL13P35225 146 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 GRIA2P42262 883 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 KCNJ6P48051 423 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 EMC4Q5J8M3 183 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 STEAP3Q658P3 488 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 TTC9BQ8N6N2 239 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.65□□□□□ -1.67
SNX4-202ENST00000465505 TOE1Q96GM8 510 aaKnown RBP4.65□□□□□ -1.67
SNX4-202ENST00000465505 CHAMP1Q96JM3 812 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 LCORQ96JN0 433 aaPredicted RBP4.65□□□□□ -1.67
SNX4-202ENST00000465505 WASF3Q9UPY6 502 aa4.65□□□□□ -1.67
SNX4-202ENST00000465505 COA3Q9Y2R0 106 aaPredicted RBP4.65□□□□□ -1.67
SNX4-202ENST00000465505 C9orf118A6NHY6 69 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 LRG1P02750 347 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 ERCC5P28715 1186 aaPredicted RBP4.64□□□□□ -1.67
SNX4-202ENST00000465505 MLLT6P55198 1093 aaPredicted RBP4.64□□□□□ -1.67
SNX4-202ENST00000465505 CHRNA2Q15822 529 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 CPZQ66K79 652 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 BORAQ6PGQ7 559 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 TEPPQ6URK8 271 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 C8orf49Q96NF6 230 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 YIPF4Q9BSR8 244 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 CLDND1Q9NY35 253 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 DTLQ9NZJ0 730 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 HSPBP1Q9NZL4 362 aa4.64□□□□□ -1.67
SNX4-202ENST00000465505 C1QTNF3-AMACRE9PGA6 284 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 B4GALT3O60512 393 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 DGKIO75912 1065 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 GJB6O95452 261 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 PPP2R2AP63151 447 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 SLC10A6Q3KNW5 377 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 PRAMEF18Q5VWM3 479 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 LIMS2Q7Z4I7 341 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 MBD6Q96DN6 1003 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 LOXL4Q96JB6 756 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 YTHDC1Q96MU7 727 aaKnown RBP4.63□□□□□ -1.67
SNX4-202ENST00000465505 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNX4-202ENST00000465505 EPN3Q9H201 632 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 EPB41L1Q9H4G0 881 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 ZNF408Q9H9D4 720 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 PCDHB4Q9Y5E5 795 aa4.63□□□□□ -1.67
SNX4-202ENST00000465505 A0A1W2PQU0 124 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 FGRP09769 529 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 ZNF20P17024 532 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 TNFRSF1AP19438 455 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 MAP4K2Q12851 820 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 EEPD1Q7L9B9 569 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 TICAM2Q86XR7 235 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 ZSWIM3Q96MP5 696 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 CLIC6Q96NY7 704 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 PPP4R1LQ9P1A2 415 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 MYOTQ9UBF9 498 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 ZNF536O15090 1300 aa4.62□□□□□ -1.67
SNX4-202ENST00000465505 MATN3O15232 486 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms