RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ACLYP53396 1101 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 ARHGAP4P98171 946 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 BEX3Q00994 111 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 SP2Q02086 613 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 GNASQ5JWF2 1037 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 BLIDQ8IZY5 108 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 OR6J1Q8NGC5 347 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 KCNJ14Q9UNX9 436 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 DNAH12Q6ZR08 3092 aa23.22■■□□□ 1.31
SKA3-205ENST00000465471 A0A1W2PQ45 241 aaPredicted RBP23.21■■□□□ 1.31
SKA3-205ENST00000465471 A0A1W2PQY0 241 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 A6NJR5 290 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 MYCNP04198 464 aaPredicted RBP23.21■■□□□ 1.31
SKA3-205ENST00000465471 ASGR1P07306 291 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 NLRX1Q86UT6 975 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 HTATIP2Q9BUP3 242 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 SENP6Q9GZR1 1112 aaPredicted RBP23.21■■□□□ 1.31
SKA3-205ENST00000465471 JADE2Q9NQC1 790 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 PDE4DIPQ5VU43 2346 aa23.21■■□□□ 1.31
SKA3-205ENST00000465471 CPT1AP50416 773 aa23.2■■□□□ 1.3
SKA3-205ENST00000465471 HMGN5P82970 282 aaKnown RBP23.2■■□□□ 1.3
SKA3-205ENST00000465471 SNX17Q15036 470 aa23.2■■□□□ 1.3
SKA3-205ENST00000465471 SENP7Q9BQF6 1050 aa23.2■■□□□ 1.3
SKA3-205ENST00000465471 MXRA8Q9BRK3 442 aa23.2■■□□□ 1.3
SKA3-205ENST00000465471 DOCK5Q9H7D0 1870 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 EDIL3O43854 480 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 CEP55Q53EZ4 464 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 CELF3Q5SZQ8 465 aaKnown RBP23.19■■□□□ 1.3
SKA3-205ENST00000465471 C1orf53Q5VUE5 145 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 MYSM1Q5VVJ2 828 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 NIPA1Q7RTP0 329 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 CDHR1Q96JP9 859 aa23.19■■□□□ 1.3
SKA3-205ENST00000465471 MEIS1O00470 390 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 MAFGO15525 162 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 GGPS1O95749 300 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 HOXD8P13378 290 aaPredicted RBP23.18■■□□□ 1.3
SKA3-205ENST00000465471 CIITAP33076 1130 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 MTMR1Q13613 665 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 LAMC2Q13753 1193 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 LRRC26Q2I0M4 334 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 CYP2W1Q8TAV3 490 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 FERMT2Q96AC1 680 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 SCN10AQ9Y5Y9 1956 aa23.18■■□□□ 1.3
SKA3-205ENST00000465471 ELP1O95163 1332 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 IGLV3-22A0A075B6J6 115 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 FAM86B1E9PN63 330 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 ZEB2O60315 1214 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 MMP1P03956 469 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 MMP3P08254 477 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 FAM86B2P0C5J1 330 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 KCNA2P16389 499 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 SLC39A5Q6ZMH5 540 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 DHX37Q8IY37 1157 aaKnown RBP23.17■■□□□ 1.3
SKA3-205ENST00000465471 PPTC7Q8NI37 304 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 OXER1Q8TDS5 423 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 AFG1LQ8WV93 481 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 TNFRSF25Q93038 417 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 BCAS3Q9H6U6 928 aa23.17■■□□□ 1.3
SKA3-205ENST00000465471 ATP9AO75110 1047 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 CABYRO75952 493 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 PURAQ00577 322 aaKnown RBP23.16■■□□□ 1.3
SKA3-205ENST00000465471 NEDD9Q14511 834 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 BRDTQ58F21 947 aaPredicted RBP23.16■■□□□ 1.3
SKA3-205ENST00000465471 KRT40Q6A162 431 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 METTL7BQ6UX53 244 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 CXCL17Q6UXB2 119 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 KRT25Q7Z3Z0 450 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 GLT1D1Q96MS3 346 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 KCNH7Q9NS40 1196 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 POLR3EQ9NVU0 708 aa23.16■■□□□ 1.3
SKA3-205ENST00000465471 USP11P51784 963 aa23.15■■□□□ 1.3
SKA3-205ENST00000465471 CUL4AQ13619 759 aa23.15■■□□□ 1.3
SKA3-205ENST00000465471 TBCKQ8TEA7 893 aa23.15■■□□□ 1.3
SKA3-205ENST00000465471 STARD7Q9NQZ5 370 aa23.15■■□□□ 1.3
SKA3-205ENST00000465471 KPNA6O60684 536 aa23.14■■□□□ 1.29
SKA3-205ENST00000465471 ARP10275 920 aa23.14■■□□□ 1.29
SKA3-205ENST00000465471 KRT2P35908 639 aa23.14■■□□□ 1.29
SKA3-205ENST00000465471 ATN1P54259 1190 aaPredicted RBP23.14■■□□□ 1.29
SKA3-205ENST00000465471 NONOQ15233 471 aaKnown RBP eCLIP23.14■■□□□ 1.29
SKA3-205ENST00000465471 HSDL1Q3SXM5 330 aa23.14■■□□□ 1.29
SKA3-205ENST00000465471 GIMAP8Q8ND71 665 aaPredicted RBP23.14■■□□□ 1.29
SKA3-205ENST00000465471 LENG9Q96B70 501 aa23.14■■□□□ 1.29
SKA3-205ENST00000465471 TRIM29Q14134 588 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 CYFIP1Q7L576 1253 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 SLC43A3Q8NBI5 491 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 FBXO18Q8NFZ0 1043 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 C8orf76Q96K31 380 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 SPATA33Q96N06 139 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 MLXIPQ9HAP2 919 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 AGO4Q9HCK5 861 aaKnown RBP23.13■■□□□ 1.29
SKA3-205ENST00000465471 BRMS1Q9HCU9 246 aa23.13■■□□□ 1.29
SKA3-205ENST00000465471 GRIN2DO15399 1336 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 NFASCO94856 1347 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 CYP3A7-CYP3A51PA0A087WV96 503 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 A0A0U1RQG5 324 aaPredicted RBP23.12■■□□□ 1.29
SKA3-205ENST00000465471 MYL3P08590 195 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 CYP3A7P24462 503 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 ZNF76P36508 570 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 CDK7P50613 346 aa23.12■■□□□ 1.29
SKA3-205ENST00000465471 RTP1P59025 263 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms