RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 ARID5AQ03989 594 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 PRPF4BQ13523 1007 aaKnown RBP12.95□□□□□ -0.34
RBM39-223ENST00000463004 PPP2R5EQ16537 467 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 TCP11Q8WWU5 503 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 SECISBP2LQ93073 1101 aaKnown RBP12.95□□□□□ -0.34
RBM39-223ENST00000463004 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 CNOT6LQ96LI5 555 aaKnown RBP12.95□□□□□ -0.34
RBM39-223ENST00000463004 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
RBM39-223ENST00000463004 PRM3Q9NNZ6 103 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 ZNF215Q9UL58 517 aaPredicted RBP12.95□□□□□ -0.34
RBM39-223ENST00000463004 ZEB2O60315 1214 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 SEC23AQ15436 765 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 RMDN3Q96TC7 470 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.341e-8■□□□□ 10.4
RBM39-223ENST00000463004 TUFT1Q9NNX1 390 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
RBM39-223ENST00000463004 CCDC66A2RUB6 948 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
RBM39-223ENST00000463004 ZNF280CQ8ND82 737 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 CCDC102AQ96A19 550 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 ARFGAP3Q9NP61 516 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 DAAM1Q9Y4D1 1078 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 GMCL1P1Q8NEA9 526 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 MAIP1Q8WWC4 291 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 EPHA7Q15375 998 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 SLFN12LQ6IEE8 588 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 RAD54LQ92698 747 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 EPSTI1Q96J88 318 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 KCND2Q9NZV8 630 aa12.94□□□□□ -0.34
RBM39-223ENST00000463004 TNNC2P02585 160 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 KLRK1P26718 216 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 GMPSP49915 693 aaPredicted RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 MTMR1Q13613 665 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 RSPH3Q86UC2 560 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 STAG2Q8N3U4 1231 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 DPF2Q92785 391 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 STXBP3O00186 592 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 ATF7P17544 494 aaPredicted RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.346e-21■□□□□ 9.2
RBM39-223ENST00000463004 GAS2L3Q86XJ1 694 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 UBL4BQ8N7F7 174 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 TEX13BQ9BXU2 312 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 KRT5P13647 590 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 FERP16591 822 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 MCM6Q14566 821 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 SYT10Q6XYQ8 523 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 LSM14BQ9BX40 385 aaKnown RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 GSTTP1A0A1W2PQM5 241 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 STAM2O75886 525 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 NR2F2P24468 414 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 STAT3P40763 770 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
RBM39-223ENST00000463004 LRRC8AQ8IWT6 810 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 TRIM58Q8NG06 486 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 C1orf112Q9NSG2 853 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
RBM39-223ENST00000463004 MUTP22033 750 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 CCDC26Q8TAB7 109 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 KMT5AQ9NQR1 393 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 ASB14A6NK59 587 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 SLC25A27O95847 323 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 AFPP02771 609 aaKnown RBP12.92□□□□□ -0.34
RBM39-223ENST00000463004 RAD51AP2Q09MP3 1159 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 GRM1Q13255 1194 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 RRAGAQ7L523 313 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 GUF1Q8N442 669 aaKnown RBP12.92□□□□□ -0.34
RBM39-223ENST00000463004 SEPT9Q9UHD8 586 aaPredicted RBP12.92□□□□□ -0.34
RBM39-223ENST00000463004 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 LDHAP00338 332 aaKnown RBP12.92□□□□□ -0.34
RBM39-223ENST00000463004 TNNI1P19237 187 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 CEP55Q53EZ4 464 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 MAEAQ7L5Y9 396 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
RBM39-223ENST00000463004 C11orf57Q6ZUT1 292 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms