RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ESRRAP11474 423 aaPredicted RBP17.15■□□□□ 0.34
SMC4-204ENST00000462787 SATB1Q01826 763 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 RAD9BQ6WBX8 426 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 HAUS1Q96CS2 278 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 THOC1Q96FV9 657 aaKnown RBP17.15■□□□□ 0.34
SMC4-204ENST00000462787 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
SMC4-204ENST00000462787 L1RE1Q9UN81 338 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.15■□□□□ 0.34
SMC4-204ENST00000462787 PLCG1P19174 1290 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 PRCPP42785 496 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 CAPN12Q6ZSI9 719 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 ZC3H18Q86VM9 953 aaKnown RBP17.15■□□□□ 0.34
SMC4-204ENST00000462787 FAM167BQ9BTA0 163 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
SMC4-204ENST00000462787 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.341e-7■■■□□ 17.3
SMC4-204ENST00000462787 IQSEC2Q5JU85 1478 aa17.14■□□□□ 0.34
SMC4-204ENST00000462787 MLH3Q9UHC1 1453 aa17.14■□□□□ 0.34
SMC4-204ENST00000462787 F8W031 263 aaPredicted RBP17.14■□□□□ 0.34
SMC4-204ENST00000462787 RCAN1P53805 252 aa17.14■□□□□ 0.34
SMC4-204ENST00000462787 RDH13Q8NBN7 331 aa17.14■□□□□ 0.34
SMC4-204ENST00000462787 FAM212AQ96EL1 285 aa17.14■□□□□ 0.34
SMC4-204ENST00000462787 JAG2Q9Y219 1238 aa17.14■□□□□ 0.34
SMC4-204ENST00000462787 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 BFSP1Q12934 665 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 PHKA1P46020 1223 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 PMS2P54278 862 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 CRYMQ14894 314 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 RIN2Q8WYP3 895 aaPredicted RBP17.14■□□□□ 0.33
SMC4-204ENST00000462787 CDC25AP30304 524 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
SMC4-204ENST00000462787 NLRP7Q8WX94 980 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 ABTB1Q969K4 478 aaPredicted RBP17.14■□□□□ 0.33
SMC4-204ENST00000462787 DTNBP1Q96EV8 351 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 MAP3K4Q9Y6R4 1608 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 KIF1BO60333 1816 aa17.14■□□□□ 0.33
SMC4-204ENST00000462787 LRRC53A6NM62 1247 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 RCN2Q14257 317 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 SPARCL1Q14515 664 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 LRRC41Q15345 812 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
SMC4-204ENST00000462787 UGGT1Q9NYU2 1555 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 KIF28PB7ZC32 967 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 MSH2P43246 934 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
SMC4-204ENST00000462787 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 FAM107AO95990 144 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 KCNA6P17658 529 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 MYL7Q01449 175 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 MKRN3Q13064 507 aaKnown RBP17.13■□□□□ 0.33
SMC4-204ENST00000462787 NR1H3Q13133 447 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 GRAMD1AQ96CP6 724 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 EYA3Q99504 573 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.332e-9■■■■■ 75.2
SMC4-204ENST00000462787 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
SMC4-204ENST00000462787 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 MYO1FO00160 1098 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 STXBP3O00186 592 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 INHBAP08476 426 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 PSMC2P35998 433 aaKnown RBP17.13■□□□□ 0.33
SMC4-204ENST00000462787 SLC30A9Q6PML9 568 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 SH2D3CQ8N5H7 860 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 OSBPL1AQ9BXW6 950 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 EDEM3Q9BZQ6 932 aa17.13■□□□□ 0.33
SMC4-204ENST00000462787 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMC4-204ENST00000462787 ARL1P40616 181 aaPredicted RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 ADCY1Q08828 1119 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 CYP4F22Q6NT55 531 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 NOA1Q8NC60 698 aaKnown RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 MTA3Q9BTC8 594 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 MIF4GDA9UHW6 222 aaKnown RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 FOXN1O15353 648 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 NCK2O43639 380 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 PDHA1P08559 390 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 PHKG2P15735 406 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ANKRD20A4Q4UJ75 823 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ANKRD20A8PQ5CZ79 823 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ANKRD20A2Q5SQ80 823 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ANKRD20A1Q5TYW2 823 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 OTUD6AQ7L8S5 288 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 RHOT2Q8IXI1 618 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 TEX9Q8N6V9 391 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 C3orf20Q8ND61 904 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 CALR3Q96L12 384 aaKnown RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 TBK1Q9UHD2 729 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 RNF8O76064 485 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ARHGAP4P98171 946 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 PROM2Q8N271 834 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms