RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ADAM11O75078 769 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 PTPRAP18433 802 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 SDSP20132 328 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 CD97P48960 835 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 RBM5P52756 815 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS36-202ENST00000462289 LRRFIP1Q32MZ4 808 aaKnown RBP6.89□□□□□ -1.31
VPS36-202ENST00000462289 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 HOOK2Q96ED9 719 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 FAM46AQ96IP4 442 aaKnown RBP6.89□□□□□ -1.31
VPS36-202ENST00000462289 IL25Q9H293 177 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 VEZTQ9HBM0 779 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 HELLSQ9NRZ9 838 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 GINM1Q9NU53 330 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 TMOD2Q9NZR1 351 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 KANSL3Q9P2N6 904 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 PI4KBQ9UBF8 816 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 HERC5Q9UII4 1024 aaKnown RBP6.89□□□□□ -1.31
VPS36-202ENST00000462289 SCAF8Q9UPN6 1271 aaKnown RBP6.89□□□□□ -1.31
VPS36-202ENST00000462289 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
VPS36-202ENST00000462289 PLIN4Q96Q06 1357 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 RAD50Q92878 1312 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 A0A0D9SFI3 127 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 M0R2C6 588 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 GPAA1O43292 621 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 MBD4O95243 580 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 IGLV1-40P01703 118 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 ZBTB48P10074 688 aaPredicted RBP6.88□□□□□ -1.31
VPS36-202ENST00000462289 GNAT2P19087 354 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 MAP2K2P36507 400 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 RRP1BQ14684 758 aaKnown RBP6.88□□□□□ -1.31
VPS36-202ENST00000462289 C12orf60Q5U649 245 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 RGMBQ6NW40 437 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 FAM117BQ6P1L5 589 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 RASAL3Q86YV0 1011 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 FOXP4Q8IVH2 680 aaPredicted RBP6.88□□□□□ -1.31
VPS36-202ENST00000462289 ANKRD13AQ8IZ07 590 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 C2orf69Q8N8R5 385 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 MIGA1Q8NAN2 632 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 FOXD4L4Q8WXT5 416 aaPredicted RBP6.88□□□□□ -1.31
VPS36-202ENST00000462289 EDEM1Q92611 657 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 CRNKL1Q9BZJ0 848 aaKnown RBP6.88□□□□□ -1.31
VPS36-202ENST00000462289 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
VPS36-202ENST00000462289 ANAPC4Q9UJX5 808 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 SNCAIPQ9Y6H5 919 aa6.88□□□□□ -1.31
VPS36-202ENST00000462289 HTTP42858 3142 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 A0A0G2JMZ2 1700 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 H3BRJ5 948 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 DHX15O43143 795 aaKnown RBP6.87□□□□□ -1.31
VPS36-202ENST00000462289 PRKAB2O43741 272 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 CTNND1O60716 968 aaKnown RBP6.87□□□□□ -1.31
VPS36-202ENST00000462289 PDGFAP04085 211 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 CHMLP26374 656 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 MZF1P28698 734 aaPredicted RBP6.87□□□□□ -1.31
VPS36-202ENST00000462289 SHMT1P34896 483 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 NF2P35240 595 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 TM4SF4P48230 202 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 NOVP48745 357 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 PLCD1P51178 756 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 HUNKP57058 714 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 HTRA3P83110 453 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 MOGSQ13724 837 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 VGLL4Q14135 290 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 DEFB115Q30KQ5 88 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
VPS36-202ENST00000462289 DCAF15Q66K64 600 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 MOB2Q70IA6 237 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 ARMC9Q7Z3E5 817 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 ZNF589Q86UQ0 364 aaPredicted RBP6.87□□□□□ -1.31
VPS36-202ENST00000462289 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 CCDC136Q96JN2 1154 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 FAM227BQ96M60 508 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 SEC62Q99442 399 aaKnown RBP6.87□□□□□ -1.31
VPS36-202ENST00000462289 FSD1Q9BTV5 496 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 ZNF341Q9BYN7 854 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 CHRDQ9H2X0 955 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 ARMT1Q9H993 441 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 OSGEPQ9NPF4 335 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 STOML1Q9UBI4 398 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 PALD1Q9ULE6 856 aa6.87□□□□□ -1.31
VPS36-202ENST00000462289 CCDC171Q6TFL3 1326 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 PATL2C9JE40 543 aaKnown RBP6.86□□□□□ -1.31
VPS36-202ENST00000462289 UBE2Q2LH0YL09 131 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 SMIM22K7EJ46 135 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 HIP1O00291 1037 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 NEFLP07196 543 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 NPR3P17342 541 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 CES1P23141 567 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 GUCY1A2P33402 732 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 CAP2P40123 477 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 JAG1P78504 1218 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 TCP10Q12799 353 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 NOGQ13253 232 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 NMIQ13287 307 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms