RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 PSRC1Q6PGN9 363 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-210ENST00000462125 TEX2Q8IWB9 1127 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 HERVK_113Q902F9 699 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 GPKOWQ92917 476 aaPredicted RBP eCLIP15.22■□□□□ 0.03
C9orf3-210ENST00000462125 VWCEQ96DN2 955 aa15.22■□□□□ 0.03
C9orf3-210ENST00000462125 ZFP91Q96JP5 570 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-210ENST00000462125 hCG_1642624A0A1W2PR95 340 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 GGPS1O95749 300 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 F2P00734 622 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 FGBP02675 491 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 UBA1P22314 1058 aaKnown RBP15.21■□□□□ 0.03
C9orf3-210ENST00000462125 RTN1Q16799 776 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 RPUSD2Q8IZ73 545 aaKnown RBP15.21■□□□□ 0.03
C9orf3-210ENST00000462125 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 AGXT2Q9BYV1 514 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 SEMA6BQ9H3T3 888 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.03
C9orf3-210ENST00000462125 KLF18A0A0U1RQI7 1052 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 FIBPO43427 364 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 PSEN2P49810 448 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 SEMA3FQ13275 785 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 NEDD9Q14511 834 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 PPP1R13LQ8WUF5 828 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 JAKMIP1Q96N16 626 aaKnown RBP15.2■□□□□ 0.02
C9orf3-210ENST00000462125 SENP7Q9BQF6 1050 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 C16orf70Q9BSU1 422 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 KATNAL1Q9BW62 490 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 BCAS3Q9H6U6 928 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 MLXIPQ9HAP2 919 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
C9orf3-210ENST00000462125 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-210ENST00000462125 CNTNAP5Q8WYK1 1306 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 PFKMP08237 780 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 CPA1P15085 419 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 CDC27P30260 824 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 BFSP2Q13515 415 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 PTGISQ16647 500 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 GDF6Q6KF10 455 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-210ENST00000462125 BLOC1S2Q6QNY1 142 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 METTL7BQ6UX53 244 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 Q6ZUG5 572 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 SCLYQ96I15 445 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 GUCD1Q96NT3 240 aa15.19■□□□□ 0.02
C9orf3-210ENST00000462125 CCDC196A0A1B0GTZ2 297 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 GOLGA8BA8MQT2 603 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 hCG_1984214I3L0E3 225 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 RPS6KB1P23443 525 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 PSMA5P28066 241 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 RFC2P35250 354 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 ADD1P35611 737 aaKnown RBP15.18■□□□□ 0.02
C9orf3-210ENST00000462125 EVCP57679 992 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 RBL2Q08999 1139 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 MFSD10Q14728 455 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 KIAA0753Q2KHM9 967 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 WWC2Q6AWC2 1192 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 TYW1BQ6NUM6 668 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 HEATR3Q7Z4Q2 680 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 NLRX1Q86UT6 975 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 ZNF713Q8N859 430 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-210ENST00000462125 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 USP26Q9BXU7 913 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 TTYH1Q9H313 450 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-210ENST00000462125 HDAC6Q9UBN7 1215 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 PCDHA6Q9UN73 950 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 PCDHA8Q9Y5H6 950 aa15.18■□□□□ 0.02
C9orf3-210ENST00000462125 MAFGO15525 162 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 ITGB5P18084 799 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 FGD1P98174 961 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 APOBRQ0VD83 1088 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 PPP1R18Q6NYC8 613 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 GIMAP8Q8ND71 665 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-210ENST00000462125 CAGE1Q8TC20 777 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 BRF1Q92994 677 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 GPRASP2Q96D09 838 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 GPR20Q99678 358 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 MTIF3Q9H2K0 278 aaKnown RBP15.17■□□□□ 0.02
C9orf3-210ENST00000462125 ZSWIM6Q9HCJ5 1215 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 RIC8AQ9NPQ8 531 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 BARHL2Q9NY43 387 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-210ENST00000462125 NOD1Q9Y239 953 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 UBIAD1Q9Y5Z9 338 aa15.17■□□□□ 0.02
C9orf3-210ENST00000462125 SPDYE3A6NKU9 549 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 H3BRB1 525 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 STXBP3O00186 592 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 SORBS3O60504 671 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 ATP9AO75110 1047 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 FOSP01100 380 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-210ENST00000462125 ZNF286BP0CG31 522 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms