RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 PAPOLBQ9NRJ5 636 aaKnown RBP6.55□□□□□ -1.36
CLK1-207ENST00000461981 PUF60Q9UHX1 559 aaKnown RBP6.55□□□□□ -1.36
CLK1-207ENST00000461981 ATP2A1O14983 1001 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 EPB41L2O43491 1005 aaKnown RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 RHOXF2BP0C7M4 288 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 MECOMQ03112 1051 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 CUL4AQ13619 759 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 MIS18BP1Q6P0N0 1132 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 FAM228AQ86W67 206 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 ZNF594Q96JF6 807 aaPredicted RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 CCDC85AQ96PX6 553 aaPredicted RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 RHOXF2Q9BQY4 288 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 UPF3AQ9H1J1 476 aaKnown RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 SLC40A1Q9NP59 571 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 ZBTB40Q9NUA8 1239 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 ZHX2Q9Y6X8 837 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 MYH8P13535 1937 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 LRRIQ3A6PVS8 624 aaPredicted RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 USP17L10C9JJH3 530 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 ERLIN1O75477 346 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 SFPQP23246 707 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLK1-207ENST00000461981 IRAK1P51617 712 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 MYO1EQ12965 1108 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 MTFR1Q15390 333 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 TKFCQ3LXA3 575 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 C16orf87Q6PH81 154 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 GADL1Q6ZQY3 521 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 EXOC8Q8IYI6 725 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 SMCR8Q8TEV9 937 aaPredicted RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 TCP11Q8WWU5 503 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 RBM41Q96IZ5 413 aaKnown RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 DNAAF2Q9NVR5 837 aaKnown RBP6.54□□□□□ -1.36
CLK1-207ENST00000461981 L1RE1Q9UN81 338 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 GABRQQ9UN88 632 aa6.54□□□□□ -1.36
CLK1-207ENST00000461981 GOLGA6L4A6NEF3 574 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 APBB1O00213 710 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 PLA2G6O60733 806 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 RNF8O76064 485 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 F13A1P00488 732 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 NBPF7P0C2Y1 421 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 CYP11B2P19099 503 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 EIF4BP23588 611 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 OAZ1P54368 228 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 GNG11P61952 73 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ERVK-9P63128 1117 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ERVK-24P63145 666 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 MKRN3Q13064 507 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 PRKG1Q13976 671 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 LHX8Q68G74 356 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 TRIM65Q6PJ69 517 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 CCDC13Q8IYE1 715 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 MAB21L3Q8N8X9 362 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 NSMCE1Q8WV22 266 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 HDAC6Q9UBN7 1215 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ADAMTS5Q9UNA0 930 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 Q9Y3F1 56 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ELL2O00472 640 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 NDUFAB1O14561 156 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 STX6O43752 255 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 AHCYL1O43865 530 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 CABYRO75952 493 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ZNF202O95125 648 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 FESP07332 822 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 HERVK_113P62684 666 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 PRPF4BQ13523 1007 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 GALNT17Q6IS24 598 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 CCDC129Q6ZRS4 1044 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 C11orf57Q6ZUT1 292 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 MICALCLQ6ZW33 695 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 MFN1Q8IWA4 741 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 DHX58Q96C10 678 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 INTS4Q96HW7 963 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 GDAP1L1Q96MZ0 367 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 WDR24Q96S15 920 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 TSC22D3Q99576 134 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 HOXC10Q9NYD6 342 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 NOB1Q9ULX3 412 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 PCDHAC2Q9Y5I4 1007 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 MOXD2PA6NHM9 499 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 LRRC10BA6NIK2 292 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 WTIPA6NIX2 430 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 DLL1O00548 723 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 MEFVO15553 781 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 BUB1BO60566 1050 aaPredicted RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 SMIM24O75264 130 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 PFKMP08237 780 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 CYBAP13498 195 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 GSDMDP57764 484 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 GNGT1P63211 74 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
CLK1-207ENST00000461981 GRIK5Q16478 980 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 RASIP1Q5U651 963 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ZNF280DQ6N043 979 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 ARMCX5Q6P1M9 558 aa6.53□□□□□ -1.36
CLK1-207ENST00000461981 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms