RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 THG1LQ9NWX6 298 aaKnown RBP4.27□□□□□ -1.73
VCL-203ENST00000461383 SLAMF8Q9P0V8 285 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 CHPF2Q9P2E5 772 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 PPARGC1AQ9UBK2 798 aaKnown RBP4.27□□□□□ -1.73
VCL-203ENST00000461383 GULP1Q9UBP9 304 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 WTIPA6NIX2 430 aaPredicted RBP4.26□□□□□ -1.73
VCL-203ENST00000461383 H7BY64 318 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 F2P00734 622 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 CKMP06732 381 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 KCNA6P17658 529 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 ID4P47928 161 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 ZP2Q05996 745 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 SPIRE1Q08AE8 756 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 ARHGAP44Q17R89 818 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 CEP128Q6ZU80 1094 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 LHFPL2Q6ZUX7 228 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 C16orf59Q7L2K0 433 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 HDGFL2Q7Z4V5 671 aaPredicted RBP4.26□□□□□ -1.73
VCL-203ENST00000461383 PASD1Q8IV76 773 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 FMNL3Q8IVF7 1028 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 TEX2Q8IWB9 1127 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 BCL7CQ8WUZ0 217 aaPredicted RBP4.26□□□□□ -1.73
VCL-203ENST00000461383 MAP6Q96JE9 813 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 JAM3Q9BX67 310 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 PUS7LQ9H0K6 701 aaKnown RBP4.26□□□□□ -1.73
VCL-203ENST00000461383 B4GALT6Q9UBX8 382 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 SLC5A6Q9Y289 635 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 RWDD3Q9Y3V2 267 aa4.26□□□□□ -1.73
VCL-203ENST00000461383 A0A1W2PQ45 241 aaPredicted RBP4.25□□□□□ -1.73
VCL-203ENST00000461383 A0A1W2PQY0 241 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 SLC12A8A0AV02 714 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 C22orf46C9J442 243 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 H7C1D1 291 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 TRAF5O00463 557 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 ULK1O75385 1050 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 USP2O75604 605 aaPredicted RBP4.25□□□□□ -1.73
VCL-203ENST00000461383 DGKIO75912 1065 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 FUCA1P04066 466 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 C8AP07357 584 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 PDE6AP16499 860 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 BPIP17213 487 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 FPR2P25090 351 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 ADCYAP1R1P41586 468 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 KIR2DL1P43626 348 aaPredicted RBP4.25□□□□□ -1.73
VCL-203ENST00000461383 KIR2DL2P43627 348 aaPredicted RBP4.25□□□□□ -1.73
VCL-203ENST00000461383 LSSP48449 732 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 RTP1P59025 263 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 DSG1Q02413 1049 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 BNIP3Q12983 259 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 TTF1Q15361 905 aaPredicted RBP4.25□□□□□ -1.73
VCL-203ENST00000461383 ZNF174Q15697 407 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 RGL3Q3MIN7 710 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 CCDC181Q5TID7 509 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 OVCH1Q7RTY7 1134 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 CABP7Q86V35 215 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 CNTD1Q8N815 330 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 SMC1BQ8NDV3 1235 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 TMEM52Q8NDY8 209 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 COG1Q8WTW3 980 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 CHTF18Q8WVB6 975 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 ALPK1Q96QP1 1244 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 ORAI3Q9BRQ5 295 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 EPB41L1Q9H4G0 881 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 FBXL7Q9UJT9 491 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 CBLCQ9ULV8 474 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 EID1Q9Y6B2 187 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 TAF6LQ9Y6J9 622 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 PHLDB1Q86UU1 1377 aa4.25□□□□□ -1.73
VCL-203ENST00000461383 FADS2P1A8MWK0 482 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 KRIT1O00522 736 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 WNT9AO14904 365 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 HIP1RO75146 1068 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 COL6A2P12110 1019 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 CD96P40200 585 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 HK2P52789 917 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 EPHB1P54762 984 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 FAPQ12884 760 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 MTMR1Q13613 665 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 GPR19Q15760 415 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 ZBTB46Q86UZ6 589 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 NLRP10Q86W26 655 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 OSTM1Q86WC4 334 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 OXR1Q8N573 874 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 LZTR1Q8N653 840 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 ANKS4BQ8N8V4 417 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 NUP43Q8NFH3 380 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 CCDC120Q96HB5 630 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 HHIPL1Q96JK4 782 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 SCYL1Q96KG9 808 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 JMJD8Q96S16 334 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 BOCQ9BWV1 1114 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 CCDC8Q9H0W5 538 aaPredicted RBP4.24□□□□□ -1.73
VCL-203ENST00000461383 PCIF1Q9H4Z3 704 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 EMC7Q9NPA0 242 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 AASDHPPTQ9NRN7 309 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 SPTLC3Q9NUV7 552 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.24□□□□□ -1.73
VCL-203ENST00000461383 LMCD1Q9NZU5 365 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 TMEM59LQ9UK28 342 aa4.24□□□□□ -1.73
VCL-203ENST00000461383 TRHDEQ9UKU6 1024 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms