RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 TINF2Q9BSI4 451 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 TMEM168Q9H0V1 697 aa5.47□□□□□ -1.53
SPTLC1-203ENST00000461132 MATN3O15232 486 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 ECI1P42126 302 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 GDF5P43026 501 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 KCNJ6P48051 423 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 ZC3H6P61129 1189 aaKnown RBP5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 INF2Q27J81 1249 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 USP51Q70EK9 711 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 TOE1Q96GM8 510 aaKnown RBP5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 C1QTNF3Q9BXJ4 246 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 IGSF5Q9NSI5 407 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 FTSJ1Q9UET6 329 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 ST6GALNAC2Q9UJ37 374 aa5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 R3HCC1Q9Y3T6 440 aaKnown RBP5.46□□□□□ -1.54
SPTLC1-203ENST00000461132 C1QTNF3-AMACRE9PGA6 284 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 HGSO14964 777 aaPredicted RBP5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 AKAP8O43823 692 aaKnown RBP5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 MAFKO60675 156 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 CPP00450 1065 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 HOXC12P31275 282 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 BCL6P41182 706 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 NAALADL2Q58DX5 795 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 TNNI3KQ59H18 835 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 ARHGEF18Q6ZSZ5 1173 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 LIMS2Q7Z4I7 341 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 FAM169BQ8N8A8 192 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 SH3RF3Q8TEJ3 882 aaPredicted RBP5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 FRS2Q8WU20 508 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 ZSWIM3Q96MP5 696 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 SYT3Q9BQG1 590 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 DEF6Q9H4E7 631 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 CROTQ9UKG9 612 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 ZNF652Q9Y2D9 606 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 PCDHB4Q9Y5E5 795 aa5.45□□□□□ -1.54
SPTLC1-203ENST00000461132 SMAD7O15105 426 aaKnown RBP5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 DGKIO75912 1065 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 STEAP3Q658P3 488 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 CIR1Q86X95 450 aaPredicted RBP5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 ZNF513Q8N8E2 541 aaPredicted RBP5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 SLC43A3Q8NBI5 491 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 SLC16A11Q8NCK7 471 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 NPLOC4Q8TAT6 608 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 BTN2A2Q8WVV5 523 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 CCDC140Q96MF4 163 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 TMEM209Q96SK2 561 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 BARX1Q9HBU1 254 aaPredicted RBP5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 ACTR10Q9NZ32 417 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 DTLQ9NZJ0 730 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 X6R8D5 127 aa5.44□□□□□ -1.54
SPTLC1-203ENST00000461132 H7BY64 318 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 C6P13671 934 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 CDK11BP21127 795 aaKnown RBP5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 IL13P35225 146 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 LSAMPQ13449 338 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 LARP1BQ659C4 914 aaKnown RBP5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 PPIL6Q8IXY8 311 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 PPP1R1BQ9UD71 204 aaPredicted RBP5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 CDK11AQ9UQ88 783 aaPredicted RBP5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 TCAF1Q9Y4C2 921 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 PCDHA2Q9Y5H9 948 aa5.43□□□□□ -1.54
SPTLC1-203ENST00000461132 AGRPO00253 132 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 KRIT1O00522 736 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 B4GALT3O60512 393 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 FGRP09769 529 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 ZNF28P17035 718 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 LTBRP36941 435 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 ETFBP38117 255 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 CR1LQ2VPA4 569 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 PRR31Q5SQ13 230 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 TRMT10BQ6PF06 316 aaKnown RBP5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 MCF2L2Q86YR7 1114 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 MRGPRX3Q96LB0 322 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 ZNF408Q9H9D4 720 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 CLDND1Q9NY35 253 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 PRKAG3Q9UGI9 489 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 ZDHHC9Q9Y397 364 aa5.42□□□□□ -1.54
SPTLC1-203ENST00000461132 SUV39H1O43463 412 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 DDAH1O94760 285 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 TACR2P21452 398 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 HMGA2P52926 109 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 PPP2CBP62714 309 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 PPP2CAP67775 309 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 ADAM9Q13443 819 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 FXNQ16595 210 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 ACBD5Q5T8D3 534 aaPredicted RBP5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 KBTBD2Q8IY47 623 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 Q8N1Y9 231 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 LGR4Q9BXB1 951 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 EPB41L1Q9H4G0 881 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 MYOTQ9UBF9 498 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 TSC22D4Q9Y3Q8 395 aa5.41□□□□□ -1.54
SPTLC1-203ENST00000461132 B4GALT4O60513 344 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 ITGAVP06756 1048 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 ZNF585AQ6P3V2 769 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 TEPPQ6URK8 271 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 C6orf15Q6UXA7 325 aaPredicted RBP5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 NLRP10Q86W26 655 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 TRIM48Q8IWZ4 208 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms