RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SMG5Q9UPR3 1016 aaKnown RBP3.94□□□□□ -1.78
HPS3-203ENST00000460822 GPR55Q9Y2T6 319 aaPredicted RBP3.94□□□□□ -1.78
HPS3-203ENST00000460822 TTBK1Q5TCY1 1321 aaPredicted RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 A0A087WZG4 1122 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 TCRBV16S1A1N1A0A5B0 115 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 BRINP1O60477 761 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 CRTAMO95727 393 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 PNLIPP16233 465 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 GALK1P51570 392 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 LAPTM5Q13571 262 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 CFAP100Q494V2 611 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 RNF219Q5W0B1 726 aaPredicted RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 ZPBP2Q6X784 338 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 MAMDC2Q7Z304 686 aaPredicted RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 NLRX1Q86UT6 975 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 C1orf159Q96HA4 380 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 HHIPL1Q96JK4 782 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 MAGEB10Q96LZ2 347 aaPredicted RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 ZDHHC15Q96MV8 337 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 TTC1Q99614 292 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 MCOLN1Q9GZU1 580 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 GEMIN8Q9NWZ8 242 aaKnown RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 ZNF281Q9Y2X9 895 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 SF3B6Q9Y3B4 125 aaKnown RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 FHOD1Q9Y613 1164 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 NISCHQ9Y2I1 1504 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 TEX51A0A1B0GUA7 166 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 TMEM82A0PJX8 343 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 ABLIM1O14639 778 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 AKAP10O43572 662 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 NUAK1O60285 661 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 ZNF205O95201 554 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 NPTXRO95502 500 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 GSTM1P09488 218 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 MED14OSP0DP75 135 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 VAV1P15498 845 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 HOXC12P31275 282 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 FLT3P36888 993 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 ECI1P42126 302 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 TMEM62Q0P6H9 643 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 SKOR2Q2VWA4 1001 aaPredicted RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 GORABQ5T7V8 394 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 CRTC3Q6UUV7 619 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 USP53Q70EK8 1073 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 SPATS2Q86XZ4 545 aaKnown RBP3.93□□□□□ -1.78
HPS3-203ENST00000460822 C1QL4Q86Z23 238 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 EXOC8Q8IYI6 725 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 COG1Q8WTW3 980 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 USP7Q93009 1102 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 TRIM8Q9BZR9 551 aa3.93□□□□□ -1.78
HPS3-203ENST00000460822 ASXL2Q76L83 1435 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 A0A1W2PQ45 241 aaPredicted RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 A0A1W2PQJ5 194 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 A0A1W2PQY0 241 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 RFXAPO00287 272 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 NEMP1O14524 444 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 VAMP4O75379 141 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 MPOP05164 745 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 ZSCAN22P10073 491 aaPredicted RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 GNALP38405 381 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 ID4P47928 161 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 DLG4P78352 724 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 SRSF3P84103 164 aaKnown RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 AMPD2Q01433 879 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 GRB10Q13322 594 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 DPY19L1Q2PZI1 675 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 SLC35F1Q5T1Q4 408 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 PIK3R6Q5UE93 754 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 HLA-DQA1Q5Y7H0 255 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 CDCA2Q69YH5 1023 aaPredicted RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 UBE2R2Q712K3 238 aaPredicted RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 NUP43Q8NFH3 380 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 PMM1Q92871 262 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 CCDC140Q96MF4 163 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 IFT22Q9H7X7 185 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 AP5S1Q9NUS5 200 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 CNOT6Q9ULM6 557 aaKnown RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 DIS3Q9Y2L1 958 aaKnown RBP3.92□□□□□ -1.78
HPS3-203ENST00000460822 PCDHA9Q9Y5H5 950 aa3.92□□□□□ -1.78
HPS3-203ENST00000460822 FADS2P1A8MWK0 482 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 B4E1Z4 1266 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 AQP7O14520 342 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 KIF3BO15066 747 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 CPP00450 1065 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 SCG5P05408 212 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 SCNN1BP51168 640 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 CYP4F8P98187 520 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 POU4F1Q01851 419 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 CYP4F3Q08477 520 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 SCRN1Q12765 414 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 PIN1Q13526 163 aaPredicted RBP3.91□□□□□ -1.78
HPS3-203ENST00000460822 HSF5Q4G112 596 aaPredicted RBP3.91□□□□□ -1.78
HPS3-203ENST00000460822 ZNF385BQ569K4 471 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 DENND5AQ6IQ26 1287 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 STYK1Q6J9G0 422 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 ZCCHC8Q6NZY4 707 aaKnown RBP3.91□□□□□ -1.78
HPS3-203ENST00000460822 ABHD17CQ6PCB6 329 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 KCNT2Q6UVM3 1135 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 MYO1HQ8N1T3 1032 aa3.91□□□□□ -1.78
HPS3-203ENST00000460822 CNTD1Q8N815 330 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms