RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SCG5P05408 212 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 BCL6P41182 706 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 LSAMPQ13449 338 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 TESK1Q15569 626 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 INF2Q27J81 1249 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 C9orf131Q5VYM1 1079 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 STEAP3Q658P3 488 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 LARP1BQ659C4 914 aaKnown RBP4.41□□□□□ -1.7
SYPL1-203ENST00000460770 FAM178BQ8IXR5 827 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 FAM169BQ8N8A8 192 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 BTN2A2Q8WVV5 523 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 EPB41L1Q9H4G0 881 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 FTSJ1Q9UET6 329 aa4.41□□□□□ -1.7
SYPL1-203ENST00000460770 KRIT1O00522 736 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 ZNF20P17024 532 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 ATF4P18848 351 aaPredicted RBP4.4□□□□□ -1.71
SYPL1-203ENST00000460770 FPR2P25090 351 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 STAT5AP42229 794 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 ZXDAP98168 799 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 CYP4F22Q6NT55 531 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 EEPD1Q7L9B9 569 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 ZNF227Q86WZ6 799 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 PPIL6Q8IXY8 311 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 FAM26EQ8N5C1 309 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 C8orf49Q96NF6 230 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 BARX1Q9HBU1 254 aaPredicted RBP4.4□□□□□ -1.71
SYPL1-203ENST00000460770 DTLQ9NZJ0 730 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 R3HCC1Q9Y3T6 440 aaKnown RBP4.4□□□□□ -1.71
SYPL1-203ENST00000460770 PCDHA2Q9Y5H9 948 aa4.4□□□□□ -1.71
SYPL1-203ENST00000460770 NPEPPSL1A6NEC2 478 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 DDAH1O94760 285 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 ITGAVP06756 1048 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 ZNF28P17035 718 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 TNFRSF1AP19438 455 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 PRR31Q5SQ13 230 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 C6orf15Q6UXA7 325 aaPredicted RBP4.39□□□□□ -1.71
SYPL1-203ENST00000460770 USP51Q70EK9 711 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 CIR1Q86X95 450 aaPredicted RBP4.39□□□□□ -1.71
SYPL1-203ENST00000460770 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 JADE2Q9NQC1 790 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 CLDND1Q9NY35 253 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 MYOTQ9UBF9 498 aa4.39□□□□□ -1.71
SYPL1-203ENST00000460770 SMAD7O15105 426 aaKnown RBP4.38□□□□□ -1.71
SYPL1-203ENST00000460770 SUSD5O60279 629 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 IL13P35225 146 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 CR1LQ2VPA4 569 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 EMC4Q5J8M3 183 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 ARHGEF18Q6ZSZ5 1173 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 STK32CQ86UX6 486 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 KLHL36Q8N4N3 616 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 RCBTB1Q8NDN9 531 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 KCTD13Q8WZ19 329 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 SEMA4AQ9H3S1 761 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 SMOC1Q9H4F8 434 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 PRKAG3Q9UGI9 489 aa4.38□□□□□ -1.71
SYPL1-203ENST00000460770 TCRBV5S2A0A599 114 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 CHGBP05060 677 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 GDF5P43026 501 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 GFRA1P56159 465 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 ADAM9Q13443 819 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 TEPPQ6URK8 271 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 DPH6Q7L8W6 267 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 NLRP10Q86W26 655 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 CCDC103Q8IW40 242 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.37□□□□□ -1.71
SYPL1-203ENST00000460770 YTHDC1Q96MU7 727 aaKnown RBP4.37□□□□□ -1.71
SYPL1-203ENST00000460770 HSPBP1Q9NZL4 362 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 CROTQ9UKG9 612 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 TSC22D4Q9Y3Q8 395 aa4.37□□□□□ -1.71
SYPL1-203ENST00000460770 IQCA1LA6NCM1 817 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 MATN3O15232 486 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 B4GALT3O60512 393 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 TADA3O75528 432 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 PPP2CBP62714 309 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 PPP2CAP67775 309 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 MAP4K2Q12851 820 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 HS1BP3Q53T59 392 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 VASNQ6EMK4 673 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 PKN3Q6P5Z2 889 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 TRMT10BQ6PF06 316 aaKnown RBP4.36□□□□□ -1.71
SYPL1-203ENST00000460770 RSPO2Q6UXX9 243 aaPredicted RBP4.36□□□□□ -1.71
SYPL1-203ENST00000460770 KBTBD2Q8IY47 623 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 IFNL2Q8IZJ0 200 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 TMEM145Q8NBT3 493 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 KREMEN2Q8NCW0 462 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 TTLL11Q8NHH1 800 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
SYPL1-203ENST00000460770 DEF6Q9H4E7 631 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 GPR27Q9NS67 375 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 TCAF1Q9Y4C2 921 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 MRVI1Q9Y6F6 885 aa4.36□□□□□ -1.71
SYPL1-203ENST00000460770 FBXO21O94952 628 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 ERCC5P28715 1186 aaPredicted RBP4.35□□□□□ -1.71
SYPL1-203ENST00000460770 EPHB4P54760 987 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 SPIRE1Q08AE8 756 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 ZNF568Q3ZCX4 644 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 SLFN13Q68D06 897 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 LIMS2Q7Z4I7 341 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 ARRDC4Q8NCT1 418 aa4.35□□□□□ -1.71
SYPL1-203ENST00000460770 ZSWIM3Q96MP5 696 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms