RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ANKRD33Q7Z3H0 272 aa17.14■□□□□ 0.33
ATG4B-213ENST00000460211 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.33
ATG4B-213ENST00000460211 TRIM22Q8IYM9 498 aa17.14■□□□□ 0.33
ATG4B-213ENST00000460211 COPS5Q92905 334 aa17.14■□□□□ 0.33
ATG4B-213ENST00000460211 DDX41Q9UJV9 622 aaKnown RBP17.14■□□□□ 0.33
ATG4B-213ENST00000460211 FRMPD4Q14CM0 1322 aa17.14■□□□□ 0.33
ATG4B-213ENST00000460211 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 A6NJR5 290 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 STXBP3O00186 592 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 TLR3O15455 904 aaKnown RBP17.13■□□□□ 0.33
ATG4B-213ENST00000460211 IFNAR1P17181 557 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 ITGA7Q13683 1181 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 PCNX4Q63HM2 1172 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 NLRX1Q86UT6 975 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 IL31RAQ8NI17 732 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 MTG1Q9BT17 334 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-213ENST00000460211 RNF26Q9BY78 433 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-213ENST00000460211 ALDH8A1Q9H2A2 487 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-213ENST00000460211 RIC8AQ9NPQ8 531 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 TMEM39AQ9NV64 488 aa17.13■□□□□ 0.33
ATG4B-213ENST00000460211 CDK7P50613 346 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
ATG4B-213ENST00000460211 UBE2SQ16763 222 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 MCTP2Q6DN12 878 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 AFG1LQ8WV93 481 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 PHKBQ93100 1093 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-213ENST00000460211 SLC26A6Q9BXS9 759 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 SLKQ9H2G2 1235 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-213ENST00000460211 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
ATG4B-213ENST00000460211 C6orf50Q9HD87 102 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 PCDHA6Q9UN73 950 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 PCDHA8Q9Y5H6 950 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 LRRC37A2A6NM11 1700 aa17.12■□□□□ 0.33
ATG4B-213ENST00000460211 KIAA0355O15063 1070 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 FIBPO43427 364 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 CDKL5O76039 1030 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 RGS20O76081 388 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 SEC24BO95487 1268 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 GNA11P29992 359 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 PURAQ00577 322 aaKnown RBP17.11■□□□□ 0.33
ATG4B-213ENST00000460211 FPGSQ05932 587 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 STK3Q13188 491 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 NTRK3Q16288 839 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 DGKDQ16760 1214 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 IL17RAQ96F46 866 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-213ENST00000460211 CDHR1Q96JP9 859 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-213ENST00000460211 LARP6Q9BRS8 491 aaKnown RBP17.11■□□□□ 0.33
ATG4B-213ENST00000460211 MLXIPQ9HAP2 919 aa17.11■□□□□ 0.33
ATG4B-213ENST00000460211 ESYT2A0FGR8 921 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 ICAM3P32942 547 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 MRPS9P82933 396 aaKnown RBP17.1■□□□□ 0.33
ATG4B-213ENST00000460211 ARHGAP1Q07960 439 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 AP3B2Q13367 1082 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 NEDD9Q14511 834 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 CELF3Q5SZQ8 465 aaKnown RBP17.1■□□□□ 0.33
ATG4B-213ENST00000460211 TYW1BQ6NUM6 668 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 CCDC148Q8NFR7 591 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
ATG4B-213ENST00000460211 SPATA31C2B4DYI2 1134 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 GGPS1O95749 300 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 MMP3P08254 477 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 DNAJB2P25686 324 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 NEK4P51957 841 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 PSMC6P62333 389 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 FAAP100Q0VG06 881 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 PKN1Q16512 942 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 USP38Q8NB14 1042 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 SLC43A3Q8NBI5 491 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 GIMAP8Q8ND71 665 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-213ENST00000460211 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 ZMYND12Q9H0C1 365 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 PRDM6Q9NQX0 595 aa17.09■□□□□ 0.33
ATG4B-213ENST00000460211 MAFGO15525 162 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 UBA1P22314 1058 aaKnown RBP17.08■□□□□ 0.32
ATG4B-213ENST00000460211 AK2P54819 239 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 FAM126BQ8IXS8 530 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 GPRASP2Q96D09 838 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
ATG4B-213ENST00000460211 SH3GLB2Q9NR46 395 aa17.08■□□□□ 0.32
ATG4B-213ENST00000460211 TMEM265A0A087WTH1 108 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-213ENST00000460211 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-213ENST00000460211 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
ATG4B-213ENST00000460211 PPFIA3O75145 1194 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 DEXIO95424 95 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 SP2Q02086 613 aa17.07■□□□□ 0.32
ATG4B-213ENST00000460211 PTPN11Q06124 597 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-213ENST00000460211 FAM47CQ5HY64 1035 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms