RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 LBHD1Q9BQE6 289 aaPredicted RBP23.77■■□□□ 1.4
VARS-218ENST00000459667 SEZ6LQ9BYH1 1024 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 GRIN2DO15399 1336 aa23.77■■□□□ 1.4
VARS-218ENST00000459667 ESYT2A0FGR8 921 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 TLR3O15455 904 aaKnown RBP23.76■■□□□ 1.39
VARS-218ENST00000459667 FIBPO43427 364 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 SORBS3O60504 671 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 SP2Q02086 613 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 CELF3Q5SZQ8 465 aaKnown RBP23.76■■□□□ 1.39
VARS-218ENST00000459667 CPLX2Q6PUV4 134 aaKnown RBP23.76■■□□□ 1.39
VARS-218ENST00000459667 NLRX1Q86UT6 975 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 FAM126BQ8IXS8 530 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 TMEM39AQ9NV64 488 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 TPCN1Q9ULQ1 816 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 SCN10AQ9Y5Y9 1956 aa23.76■■□□□ 1.39
VARS-218ENST00000459667 FOSP01100 380 aaPredicted RBP23.75■■□□□ 1.39
VARS-218ENST00000459667 BMP8BP34820 402 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 SSRP1Q08945 709 aaKnown RBP23.75■■□□□ 1.39
VARS-218ENST00000459667 SEMA3FQ13275 785 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 AP3B2Q13367 1082 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 MYSM1Q5VVJ2 828 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 PPTC7Q8NI37 304 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 PGBD1Q96JS3 809 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 ANO3Q9BYT9 981 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 ZMYND12Q9H0C1 365 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 SLKQ9H2G2 1235 aaPredicted RBP23.75■■□□□ 1.39
VARS-218ENST00000459667 C6orf50Q9HD87 102 aa23.75■■□□□ 1.39
VARS-218ENST00000459667 SPATA31C2B4DYI2 1134 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 KIAA0355O15063 1070 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 CLK2P49760 499 aaKnown RBP23.74■■□□□ 1.39
VARS-218ENST00000459667 NEK4P51957 841 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 SCRN1Q12765 414 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 DGKDQ16760 1214 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 CCDC148Q8NFR7 591 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 GPRASP2Q96D09 838 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 SPATA33Q96N06 139 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 UBE2OQ9C0C9 1292 aaKnown RBP23.74■■□□□ 1.39
VARS-218ENST00000459667 MLXIPQ9HAP2 919 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 TMEM260Q9NX78 707 aa23.74■■□□□ 1.39
VARS-218ENST00000459667 PFKFB2O60825 505 aa23.73■■□□□ 1.39
VARS-218ENST00000459667 RAG1P15918 1043 aa23.73■■□□□ 1.39
VARS-218ENST00000459667 NEDD9Q14511 834 aa23.73■■□□□ 1.39
VARS-218ENST00000459667 VPS54Q9P1Q0 977 aa23.73■■□□□ 1.39
VARS-218ENST00000459667 TBX21Q9UL17 535 aa23.73■■□□□ 1.39
VARS-218ENST00000459667 UBIAD1Q9Y5Z9 338 aa23.73■■□□□ 1.39
VARS-218ENST00000459667 A0A1W2PPC1 479 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 CDKL5O76039 1030 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 DEXIO95424 95 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 CD4P01730 458 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 ITGB5P18084 799 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 GNA11P29992 359 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 NBPF20Q3BBV1 942 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 HSDL1Q3SXM5 330 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 JAKMIP3Q5VZ66 844 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 BADQ92934 168 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 CDHR1Q96JP9 859 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 DOCK5Q9H7D0 1870 aa23.72■■□□□ 1.39
VARS-218ENST00000459667 TRIOBPQ9H2D6 2365 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 B4GALT4O60513 344 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 ITGB8P26012 769 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 CHMP4BP1P59074 171 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 FAM47CQ5HY64 1035 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 METTL7BQ6UX53 244 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 REXO1Q8N1G1 1221 aaKnown RBP23.71■■□□□ 1.39
VARS-218ENST00000459667 SENP7Q9BQF6 1050 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 BCAS3Q9H6U6 928 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 SH3GLB2Q9NR46 395 aa23.71■■□□□ 1.39
VARS-218ENST00000459667 ZNF286BP0CG31 522 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 HOXD8P13378 290 aaPredicted RBP23.7■■□□□ 1.38
VARS-218ENST00000459667 SREBF1P36956 1147 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 MTMR1Q13613 665 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 MCTP2Q6DN12 878 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 NFRKBQ6P4R8 1299 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 CYFIP1Q7L576 1253 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 BICD2Q8TD16 824 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 PPP1R13LQ8WUF5 828 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 KAT2BQ92831 832 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 TRPV6Q9H1D0 765 aa23.7■■□□□ 1.38
VARS-218ENST00000459667 NOP56O00567 594 aaKnown RBP23.69■■□□□ 1.38
VARS-218ENST00000459667 ADAMTS3O15072 1205 aa23.69■■□□□ 1.38
VARS-218ENST00000459667 PPFIA4O75335 1185 aa23.69■■□□□ 1.38
VARS-218ENST00000459667 GIMAP8Q8ND71 665 aaPredicted RBP23.69■■□□□ 1.38
VARS-218ENST00000459667 MXRA8Q9BRK3 442 aa23.69■■□□□ 1.38
VARS-218ENST00000459667 KATNAL1Q9BW62 490 aa23.69■■□□□ 1.38
VARS-218ENST00000459667 PPP1R12CQ9BZL4 782 aa23.69■■□□□ 1.38
VARS-218ENST00000459667 UPF2Q9HAU5 1272 aaKnown RBP23.69■■□□□ 1.38
VARS-218ENST00000459667 JADE2Q9NQC1 790 aa23.69■■□□□ 1.38
VARS-218ENST00000459667 LARGE1O95461 756 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 F2P00734 622 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 TIMP1P01033 207 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 NLRP5P59047 1200 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 ARHGAP4P98171 946 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 PTPN11Q06124 597 aaPredicted RBP23.68■■□□□ 1.38
VARS-218ENST00000459667 ME3Q16798 604 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 TDHQ8IZJ6 230 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 C22orf23Q9BZE7 217 aa23.68■■□□□ 1.38
VARS-218ENST00000459667 TRMT13Q9NUP7 481 aaKnown RBP23.68■■□□□ 1.38
VARS-218ENST00000459667 STK36Q9NRP7 1315 aa23.67■■□□□ 1.38
VARS-218ENST00000459667 MAFGO15525 162 aa23.67■■□□□ 1.38
VARS-218ENST00000459667 ATP9AO75110 1047 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms