RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RAB11FIP4Q86YS3 637 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 CMTR1Q8N1G2 835 aaKnown RBP20.55■□□□□ 0.88
MSH6-207ENST00000456246 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
MSH6-207ENST00000456246 HERVK_113Q902F9 699 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 KAT2BQ92831 832 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 MLXIPQ9HAP2 919 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
MSH6-207ENST00000456246 CNTNAP5Q8WYK1 1306 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 CCDC196A0A1B0GTZ2 297 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 FGBP02675 491 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 CYP2C9P11712 490 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
MSH6-207ENST00000456246 BLOC1S2Q6QNY1 142 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 NLRX1Q86UT6 975 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 C7orf31Q8N865 590 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 RETREG2Q8NC44 543 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 TCEANC2Q96MN5 208 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 EHMT1Q9H9B1 1298 aa20.54■□□□□ 0.88
MSH6-207ENST00000456246 KLF18A0A0U1RQI7 1052 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 SPDYE3A6NKU9 549 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 GOLGA8AA7E2F4 631 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 ACRP10323 421 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 PSMA5P28066 241 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 PSEN2P49810 448 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 CHMP4BP1P59074 171 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 PTGISQ16647 500 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 HSDL1Q3SXM5 330 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 METTL7BQ6UX53 244 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 FBXL16Q8N461 479 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 GIMAP8Q8ND71 665 aaPredicted RBP20.53■□□□□ 0.88
MSH6-207ENST00000456246 CDHR1Q96JP9 859 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
MSH6-207ENST00000456246 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 SNX14Q9Y5W7 946 aa20.53■□□□□ 0.88
MSH6-207ENST00000456246 SPATA31C2B4DYI2 1134 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 HAS3O00219 553 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 NOP56O00567 594 aaKnown RBP20.52■□□□□ 0.88
MSH6-207ENST00000456246 SP2Q02086 613 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 MFSD10Q14728 455 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 KIAA0753Q2KHM9 967 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 SENP7Q9BQF6 1050 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 GLT8D2Q9H1C3 349 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 GTF2IRD1Q9UHL9 959 aa20.52■□□□□ 0.88
MSH6-207ENST00000456246 TANC1Q9C0D5 1861 aa20.52■□□□□ 0.87
MSH6-207ENST00000456246 PARNO95453 639 aaKnown RBP20.51■□□□□ 0.87
MSH6-207ENST00000456246 ZNF286BP0CG31 522 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 DNAJB2P25686 324 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 AFAP1L1Q8TED9 768 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 GPRASP2Q96D09 838 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 SCLYQ96I15 445 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 SEMA6BQ9H3T3 888 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 PPP4R2Q9NY27 417 aa20.51■□□□□ 0.87
MSH6-207ENST00000456246 hCG_1642624A0A1W2PR95 340 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.87
MSH6-207ENST00000456246 NAPAP54920 295 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 RBL2Q08999 1139 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 FUT2Q10981 343 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 WWC2Q6AWC2 1192 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 GDF6Q6KF10 455 aaPredicted RBP20.5■□□□□ 0.87
MSH6-207ENST00000456246 GPKOWQ92917 476 aaPredicted RBP eCLIP20.5■□□□□ 0.871e-10■■□□□ 11.7
MSH6-207ENST00000456246 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 USP26Q9BXU7 913 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
MSH6-207ENST00000456246 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
MSH6-207ENST00000456246 NID2Q14112 1375 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 FOSP01100 380 aaPredicted RBP20.49■□□□□ 0.87
MSH6-207ENST00000456246 IQCF3P0C7M6 154 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 ACTN1P12814 892 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 RPS6KB1P23443 525 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 SEMA3FQ13275 785 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 RAB30Q15771 203 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 Q6ZUG5 572 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 OTOP2Q7RTS6 562 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 ZFP91Q96JP5 570 aaPredicted RBP20.49■□□□□ 0.87
MSH6-207ENST00000456246 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 AGXT2Q9BYV1 514 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 HDAC6Q9UBN7 1215 aa20.49■□□□□ 0.87
MSH6-207ENST00000456246 MAFGO15525 162 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 PTK7Q13308 1070 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 UBE2SQ16763 222 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 PPP1R13LQ8WUF5 828 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 BRF1Q92994 677 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 TIFAQ96CG3 184 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 FAM161BQ96MY7 647 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 C16orf70Q9BSU1 422 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 RIC8AQ9NPQ8 531 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 ZNF215Q9UL58 517 aaPredicted RBP20.48■□□□□ 0.87
MSH6-207ENST00000456246 PCDHA6Q9UN73 950 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 PCDHA8Q9Y5H6 950 aa20.48■□□□□ 0.87
MSH6-207ENST00000456246 V9GY48 417 aaPredicted RBP20.48■□□□□ 0.87
MSH6-207ENST00000456246 H3BRB1 525 aa20.47■□□□□ 0.87
MSH6-207ENST00000456246 SORBS3O60504 671 aa20.47■□□□□ 0.87
MSH6-207ENST00000456246 LGALS2P05162 132 aa20.47■□□□□ 0.87
MSH6-207ENST00000456246 CDC27P30260 824 aa20.47■□□□□ 0.87
MSH6-207ENST00000456246 ADCY7P51828 1080 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms