RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 GPS2Q13227 327 aa22.28■■□□□ 1.16
CSPG5-203ENST00000456150 LRRC55Q6ZSA7 311 aa22.28■■□□□ 1.16
CSPG5-203ENST00000456150 MSL3Q8N5Y2 521 aaKnown RBP22.28■■□□□ 1.16
CSPG5-203ENST00000456150 C7orf43Q8WVR3 580 aa22.28■■□□□ 1.16
CSPG5-203ENST00000456150 PURBQ96QR8 312 aaKnown RBP22.28■■□□□ 1.16
CSPG5-203ENST00000456150 ATP1A1P05023 1023 aaKnown RBP22.27■■□□□ 1.16
CSPG5-203ENST00000456150 COASYQ13057 564 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 DNAJC19Q96DA6 116 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 ENC1O14682 589 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 USO1O60763 962 aaKnown RBP22.27■■□□□ 1.16
CSPG5-203ENST00000456150 USP11P51784 963 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 NFIAQ12857 509 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 MKL1Q969V6 931 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 ZDHHC15Q96MV8 337 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 EDEM3Q9BZQ6 932 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 LACRTQ9GZZ8 138 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 PANK4Q9NVE7 773 aa22.27■■□□□ 1.16
CSPG5-203ENST00000456150 SIPA1L1O43166 1804 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 POLR3GO15318 223 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-203ENST00000456150 DPEP1P16444 411 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 KCNA3P22001 575 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 ECM1Q16610 540 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 FAM26FQ5R3K3 315 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 ARHGAP27Q6ZUM4 889 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 PODNQ7Z5L7 613 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 SECISBP2LQ93073 1101 aaKnown RBP22.26■■□□□ 1.15
CSPG5-203ENST00000456150 MMRN2Q9H8L6 949 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 FAM207AQ9NSI2 230 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-203ENST00000456150 NYAP2Q9P242 653 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 TFR2Q9UP52 801 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 RCCD1A6NED2 376 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 NKRFO15226 690 aaKnown RBP eCLIP22.26■■□□□ 1.15
CSPG5-203ENST00000456150 EIF3JO75822 258 aaKnown RBP22.26■■□□□ 1.15
CSPG5-203ENST00000456150 MCM3P25205 808 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 QRICH1Q2TAL8 776 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 MCTP2Q6DN12 878 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 WDR93Q6P2C0 686 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 CCDC65Q8IXS2 484 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 NOA1Q8NC60 698 aaKnown RBP22.26■■□□□ 1.15
CSPG5-203ENST00000456150 MRIQ9BWK5 157 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 HDAC6Q9UBN7 1215 aa22.26■■□□□ 1.15
CSPG5-203ENST00000456150 SLC1A4P43007 532 aa22.25■■□□□ 1.15
CSPG5-203ENST00000456150 VSNL1P62760 191 aa22.25■■□□□ 1.15
CSPG5-203ENST00000456150 FKBP3Q00688 224 aaKnown RBP22.25■■□□□ 1.15
CSPG5-203ENST00000456150 ABCB6Q9NP58 842 aa22.25■■□□□ 1.15
CSPG5-203ENST00000456150 L1RE1Q9UN81 338 aa22.25■■□□□ 1.15
CSPG5-203ENST00000456150 PCDHA1Q9Y5I3 950 aa22.25■■□□□ 1.15
CSPG5-203ENST00000456150 C21orf2O43822 256 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 CYP27A1Q02318 531 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 AP3B2Q13367 1082 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 LRRC41Q15345 812 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 ZCWPW2Q504Y3 356 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 MOXD1Q6UVY6 613 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 SLFN12Q8IYM2 578 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 TRIM58Q8NG06 486 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 NEK11Q8NG66 645 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 ANO3Q9BYT9 981 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 MTFR1LQ9H019 292 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 DEF6Q9H4E7 631 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 DNAJC18Q9H819 358 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 COL4A3BPQ9Y5P4 624 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 CYP3A7-CYP3A51PA0A087WV96 503 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 LCA5LO95447 670 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 EEF2P13639 858 aaKnown RBP22.24■■□□□ 1.15
CSPG5-203ENST00000456150 CYP3A7P24462 503 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 FKBP1AP62942 108 aaKnown RBP22.24■■□□□ 1.15
CSPG5-203ENST00000456150 CDC37Q16543 378 aaPredicted RBP22.24■■□□□ 1.15
CSPG5-203ENST00000456150 CERKLQ49MI3 558 aaPredicted RBP22.24■■□□□ 1.15
CSPG5-203ENST00000456150 SLFN13Q68D06 897 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 CEP63Q96MT8 703 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 TRIM34Q9BYJ4 488 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 IFIH1Q9BYX4 1025 aaKnown RBP22.24■■□□□ 1.15
CSPG5-203ENST00000456150 KCNMB3Q9NPA1 279 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 ARHGAP20Q9P2F6 1191 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
CSPG5-203ENST00000456150 GNA14O95837 355 aa22.23■■□□□ 1.15
CSPG5-203ENST00000456150 SSBP05455 408 aaKnown RBP eCLIP22.23■■□□□ 1.15
CSPG5-203ENST00000456150 CYP2C19P33261 490 aa22.23■■□□□ 1.15
CSPG5-203ENST00000456150 KIF11P52732 1056 aa22.23■■□□□ 1.15
CSPG5-203ENST00000456150 TXLNBQ8N3L3 684 aa22.23■■□□□ 1.15
CSPG5-203ENST00000456150 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
CSPG5-203ENST00000456150 MACROD2A1Z1Q3 448 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L15C9J2P7 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L13C9JLJ4 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L11C9JVI0 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L18D6R9N7 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L22D6RA61 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L17D6RBQ6 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L19D6RCP7 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L20D6RJB6 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 EPHB6O15197 1021 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 RAD21O60216 631 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 TACC1O75410 805 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 PLA2G4BP0C869 781 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP14P54578 494 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 HDLBPQ00341 1268 aaKnown RBP22.22■■□□□ 1.15
CSPG5-203ENST00000456150 USP17L24Q0WX57 530 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 CCDC40Q4G0X9 1142 aa22.22■■□□□ 1.15
CSPG5-203ENST00000456150 IQCEQ6IPM2 695 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms