RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
HDAC4-205ENST00000454542 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 NR2E3Q9Y5X4 410 aa16.23■□□□□ 0.19
HDAC4-205ENST00000454542 A0A0U1RQG5 324 aaPredicted RBP16.22■□□□□ 0.19
HDAC4-205ENST00000454542 SPATA31C2B4DYI2 1134 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 H0YGN5 161 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 M0R2N6 131 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 ITGB5P18084 799 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 GNA11P29992 359 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 CDK7P50613 346 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 SP2Q02086 613 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 ANKRD33Q7Z3H0 272 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 PPTC7Q8NI37 304 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 ZFP91Q96JP5 570 aaPredicted RBP16.22■□□□□ 0.19
HDAC4-205ENST00000454542 PGBD1Q96JS3 809 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
HDAC4-205ENST00000454542 GRIN2DO15399 1336 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 FDPSP14324 419 aaKnown RBP16.21■□□□□ 0.19
HDAC4-205ENST00000454542 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 CELF3Q5SZQ8 465 aaKnown RBP16.21■□□□□ 0.19
HDAC4-205ENST00000454542 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 TOX2Q96NM4 488 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 LIMCH1Q9UPQ0 1083 aa16.21■□□□□ 0.19
HDAC4-205ENST00000454542 MROH7Q68CQ1 1323 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 ARVCFO00192 962 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 KPNA6O60684 536 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 GGPS1O95749 300 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 CYP3A4P08684 503 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 KCNA2P16389 499 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 BRDTQ58F21 947 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-205ENST00000454542 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 NLRX1Q86UT6 975 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 AFG1LQ8WV93 481 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 CDHR1Q96JP9 859 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 MTG1Q9BT17 334 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-205ENST00000454542 PRO3102Q9H379 93 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 PDLIM7Q9NR12 457 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 ATP11BQ9Y2G3 1177 aa16.2■□□□□ 0.18
HDAC4-205ENST00000454542 CEP290O15078 2479 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 EDIL3O43854 480 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 ARHGAP4P98171 946 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 TLE2Q04725 743 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 NEDD9Q14511 834 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 METTL7BQ6UX53 244 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 NIPA1Q7RTP0 329 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 MXRA8Q9BRK3 442 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 PHF20Q9BVI0 1012 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-205ENST00000454542 RTEL1Q9NZ71 1219 aa16.19■□□□□ 0.18
HDAC4-205ENST00000454542 IGLV3-22A0A075B6J6 115 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 MAFGO15525 162 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 JAK2O60674 1132 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 F2P00734 622 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 HSDL1Q3SXM5 330 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
HDAC4-205ENST00000454542 KAT2BQ92831 832 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 ZSCAN31Q96LW9 406 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-205ENST00000454542 BCAS3Q9H6U6 928 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-205ENST00000454542 TBX21Q9UL17 535 aa16.18■□□□□ 0.18
HDAC4-205ENST00000454542 TANC1Q9C0D5 1861 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 MEIS1O00470 390 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 ATP9AO75110 1047 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 CD4P01730 458 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 MYL3P08590 195 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 CLTBP09497 229 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 CIITAP33076 1130 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 NLRP5P59047 1200 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 PSMC6P62333 389 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 MTMR1Q13613 665 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 ITGA7Q13683 1181 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 DGKDQ16760 1214 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 BLIDQ8IZY5 108 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 WASF1Q92558 559 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 SPATA33Q96N06 139 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 LLPHQ9BRT6 129 aaKnown RBP16.17■□□□□ 0.18
HDAC4-205ENST00000454542 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-205ENST00000454542 NFASCO94856 1347 aa16.17■□□□□ 0.18
HDAC4-205ENST00000454542 FAM86B1E9PN63 330 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 HAS3O00219 553 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 KIAA0355O15063 1070 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 ST18O60284 1047 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 PQBP1O60828 265 aaKnown RBP16.16■□□□□ 0.18
HDAC4-205ENST00000454542 DTNBO60941 627 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms