RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 BEX3Q00994 111 aa31.94■■■□□ 2.7
SMARCC1-203ENST00000454240 FSCN1Q16658 493 aaKnown RBP31.94■■■□□ 2.7
SMARCC1-203ENST00000454240 PCSK9Q8NBP7 692 aaKnown RBP31.94■■■□□ 2.7
SMARCC1-203ENST00000454240 JADE2Q9NQC1 790 aa31.94■■■□□ 2.7
SMARCC1-203ENST00000454240 DOCK5Q9H7D0 1870 aa31.94■■■□□ 2.7
SMARCC1-203ENST00000454240 MOXD2PA6NHM9 499 aa31.93■■■□□ 2.7
SMARCC1-203ENST00000454240 ARHGAP1Q07960 439 aa31.93■■■□□ 2.7
SMARCC1-203ENST00000454240 EMID1Q96A84 441 aaPredicted RBP31.93■■■□□ 2.7
SMARCC1-203ENST00000454240 MXRA8Q9BRK3 442 aa31.93■■■□□ 2.7
SMARCC1-203ENST00000454240 SENP6Q9GZR1 1112 aaPredicted RBP31.93■■■□□ 2.7
SMARCC1-203ENST00000454240 ACLYP53396 1101 aa31.92■■■□□ 2.7
SMARCC1-203ENST00000454240 MLLT1Q03111 559 aaPredicted RBP31.92■■■□□ 2.7
SMARCC1-203ENST00000454240 CDHR1Q96JP9 859 aa31.92■■■□□ 2.7
SMARCC1-203ENST00000454240 ALPK3Q96L96 1907 aa31.92■■■□□ 2.7
SMARCC1-203ENST00000454240 TNRC18O15417 2968 aaPredicted RBP31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 A6NJR5 290 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 MAFGO15525 162 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 ASGR1P07306 291 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 UBA1P22314 1058 aaKnown RBP31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 CEP55Q53EZ4 464 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 CELF3Q5SZQ8 465 aaKnown RBP31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 KRT40Q6A162 431 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 CYP2W1Q8TAV3 490 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 DNAH12Q6ZR08 3092 aa31.91■■■□□ 2.7
SMARCC1-203ENST00000454240 EDIL3O43854 480 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 MMP1P03956 469 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 CPT1AP50416 773 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 MTMR1Q13613 665 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 LAMC2Q13753 1193 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 TRIM29Q14134 588 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 MYSM1Q5VVJ2 828 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 DHX37Q8IY37 1157 aaKnown RBP31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 FAM184AQ8NB25 1140 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 OXER1Q8TDS5 423 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 SENP7Q9BQF6 1050 aa31.9■■■□□ 2.7
SMARCC1-203ENST00000454240 MEIS1O00470 390 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 ZEB2O60315 1214 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 GGPS1O95749 300 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 CUL4AQ13619 759 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 NIPA1Q7RTP0 329 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 KRT25Q7Z3Z0 450 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 FERMT2Q96AC1 680 aa31.89■■■□□ 2.7
SMARCC1-203ENST00000454240 A0A1W2PQ45 241 aaPredicted RBP31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 A0A1W2PQY0 241 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 FAM86B1E9PN63 330 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 FAM86B2P0C5J1 330 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 CIITAP33076 1130 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 KRT2P35908 639 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 ZNF76P36508 570 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 USP11P51784 963 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 FOSBP53539 338 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 NEDD9Q14511 834 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 TBCKQ8TEA7 893 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 AFG1LQ8WV93 481 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 SNX21Q969T3 373 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 C8orf76Q96K31 380 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 HTATIP2Q9BUP3 242 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 BCAS3Q9H6U6 928 aa31.88■■■□□ 2.69
SMARCC1-203ENST00000454240 ATP9AO75110 1047 aa31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 KCNA2P16389 499 aa31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 NONOQ15233 471 aaKnown RBP eCLIP31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 BRDTQ58F21 947 aaPredicted RBP31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 TNFRSF25Q93038 417 aa31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 BRMS1Q9HCU9 246 aa31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 KCNH7Q9NS40 1196 aa31.87■■■□□ 2.69
SMARCC1-203ENST00000454240 IGLV3-22A0A075B6J6 115 aa31.86■■■□□ 2.69
SMARCC1-203ENST00000454240 SLC39A5Q6ZMH5 540 aa31.86■■■□□ 2.69
SMARCC1-203ENST00000454240 FBXO18Q8NFZ0 1043 aa31.86■■■□□ 2.69
SMARCC1-203ENST00000454240 PPTC7Q8NI37 304 aa31.86■■■□□ 2.69
SMARCC1-203ENST00000454240 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.86■■■□□ 2.69
SMARCC1-203ENST00000454240 MMP3P08254 477 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 ARP10275 920 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 NR5A1Q13285 461 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 METTL7BQ6UX53 244 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 CXCL17Q6UXB2 119 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 GIMAP8Q8ND71 665 aaPredicted RBP31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 GLT1D1Q96MS3 346 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 MLXIPQ9HAP2 919 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 POLR3EQ9NVU0 708 aa31.85■■■□□ 2.69
SMARCC1-203ENST00000454240 ELP1O95163 1332 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 CCDC194A0A1B0GVG4 234 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 BTBD18B2RXH4 712 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 KPNA6O60684 536 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 CABYRO75952 493 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 PURAQ00577 322 aaKnown RBP31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 GUCY1B3Q02153 619 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 HSDL1Q3SXM5 330 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 CYFIP1Q7L576 1253 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 DIS3L2Q8IYB7 885 aaKnown RBP31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 SPATA33Q96N06 139 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 STARD7Q9NQZ5 370 aa31.84■■■□□ 2.69
SMARCC1-203ENST00000454240 K7ELQ4 463 aaPredicted RBP31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 SORBS3O60504 671 aa31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 GJB2P29033 226 aa31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 ATN1P54259 1190 aaPredicted RBP31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 SNX17Q15036 470 aa31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 LRRC26Q2I0M4 334 aa31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 EARS2Q5JPH6 523 aaKnown RBP31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 C1orf53Q5VUE5 145 aa31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 PLA2G4DQ86XP0 818 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms