RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 FOXN1O15353 648 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 NDUFV2P19404 249 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 USP14P54578 494 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 MYL5Q02045 173 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 TMEM266Q2M3C6 531 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 Q4G0T1 1027 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 NAALADL2Q58DX5 795 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 TJAP1Q5JTD0 557 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 NOL9Q5SY16 702 aaKnown RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 HYIQ5T013 277 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 FAM83BQ5T0W9 1011 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 RRAGBQ5VZM2 374 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 MIGA2Q7L4E1 593 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 AOPEPQ8N6M6 819 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 ENOX1Q8TC92 643 aaKnown RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 ERCC4Q92889 916 aaPredicted RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 C12orf42Q96LP6 360 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 NUP88Q99567 741 aaPredicted RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 FHDC1Q9C0D6 1143 aaPredicted RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 KCNMB3Q9NPA1 279 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 RMND1Q9NWS8 449 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 ZKSCAN5Q9Y2L8 839 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 MRPL11Q9Y3B7 192 aaKnown RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 RABGAP1Q9Y3P9 1069 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
RFC4-209ENST00000448497 OTOFQ9HC10 1997 aa7.79□□□□□ -1.16
RFC4-209ENST00000448497 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
RFC4-209ENST00000448497 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 BIN1O00499 593 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 SLC37A4O43826 429 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 TDP2O95551 362 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 PPP1R2P41236 205 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 STAT6P42226 847 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 COPS2P61201 443 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 MTMR2Q13614 643 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 UBE2SQ16763 222 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 TBC1D10BQ4KMP7 808 aaPredicted RBP7.78□□□□□ -1.16
RFC4-209ENST00000448497 COBLL1Q53SF7 1204 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 ARHGAP27Q6ZUM4 889 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 CABP7Q86V35 215 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 SCYL3Q8IZE3 742 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 PRPF38AQ8NAV1 312 aaKnown RBP7.78□□□□□ -1.16
RFC4-209ENST00000448497 HAS1Q92839 578 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 FAM20AQ96MK3 541 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 C7orf25Q9BPX7 421 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 MMTAG2Q9BU76 263 aaKnown RBP7.78□□□□□ -1.16
RFC4-209ENST00000448497 TRIM5Q9C035 493 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 HSD3B7Q9H2F3 369 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 AS3MTQ9HBK9 375 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 LIMD1Q9UGP4 676 aa7.78□□□□□ -1.16
RFC4-209ENST00000448497 DDX25Q9UHL0 483 aaKnown RBP7.78□□□□□ -1.16
RFC4-209ENST00000448497 SSC5DA1L4H1 1573 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 SPDYE3A6NKU9 549 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 RAD21O60216 631 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 ZNF500O60304 480 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 RHOBTB3O94955 611 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 ICAM1P05362 532 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 ZNF18P17022 549 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 HIRAP54198 1017 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 BACE1P56817 501 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 AMPD3Q01432 767 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 KCNC4Q03721 635 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 IKQ13123 557 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 CUL4BQ13620 913 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 KARSQ15046 597 aaKnown RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 SUPT20HL1Q3ZLR7 823 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 TMEM119Q4V9L6 283 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 NBPF12Q5TAG4 269 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 ZNF658Q5TYW1 1059 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 ANGEL2Q5VTE6 544 aaKnown RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 FOXR2Q6PJQ5 311 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 USP17L6PQ6QN14 398 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 SPICE1Q8N0Z3 855 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 ETNPPLQ8TBG4 499 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 TRPM4Q8TD43 1214 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 LENG9Q96B70 501 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 KLRG1Q96E93 195 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 CALML4Q96GE6 196 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 P2RX7Q99572 595 aaKnown RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 SLF1Q9BQI6 1058 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 SYT17Q9BSW7 474 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 GLIS2Q9BZE0 524 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 LRRC27Q9C0I9 530 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 NT5C3AQ9H0P0 336 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 TTC12Q9H892 705 aaPredicted RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 EHMT1Q9H9B1 1298 aa7.77□□□□□ -1.17
RFC4-209ENST00000448497 ADARB2Q9NS39 739 aaKnown RBP7.77□□□□□ -1.17
RFC4-209ENST00000448497 IMPACTQ9P2X3 320 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms