RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TBC1D12O60347 775 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 AKAP5P24588 427 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CSTF3Q12996 717 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 EIF2B5Q13144 721 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 MYD88Q99836 296 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ZC3H7BQ9UGR2 993 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CLASP2O75122 1294 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 PAPOLAP51003 745 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ADCY2Q08462 1091 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 BBS7Q8IWZ6 715 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 LZTS2Q9BRK4 669 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 LLPHQ9BRT6 129 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 YIPF3Q9GZM5 350 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SLC5A4Q9NY91 659 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SLC4A4Q9Y6R1 1079 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CUX1P39880 1505 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CFAP73A6NFT4 308 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CDC27P30260 824 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TBL3Q12788 808 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SPARCL1Q14515 664 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SLC10A5Q5PT55 438 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 ING3Q9NXR8 418 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 CNTRLQ7Z7A1 2325 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 KLHL18O94889 574 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 IFNAR2P48551 515 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TCP11X2Q5H9J9 407 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 C1orf228Q6PIY5 440 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 NEK8Q86SG6 692 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 OTULINQ96BN8 352 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 MLPHQ9BV36 600 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-202ENST00000448238 PCDHB13Q9Y5F0 798 aa9.62□□□□□ -0.87
NIPBL-202ENST00000448238 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 HOXC8P31273 242 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 BTBD6Q96KE9 485 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 SOX5P35711 763 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 PRKCQQ04759 706 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ARHGAP17Q68EM7 881 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 CHMP1BQ7LBR1 199 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ATP8B4Q8TF62 1192 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 RMDN1Q96DB5 314 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 TNNQ9UQP3 1299 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 PARP3Q9Y6F1 533 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 CYP7A1P22680 504 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 MKRN3Q13064 507 aaKnown RBP9.61□□□□□ -0.87
NIPBL-202ENST00000448238 TRIM16LQ309B1 348 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ARMCX4Q5H9R4 360 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 SLFN12LQ6IEE8 588 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 MYCT1Q8N699 235 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 PLEKHA8Q96JA3 519 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 HAUS4Q9H6D7 363 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ADAM30Q9UKF2 790 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 KCNH3Q9ULD8 1083 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 CAMSAP2Q08AD1 1489 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 KPNA7A9QM74 516 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 POLR2DO15514 142 aaKnown RBP9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ABL1P00519 1130 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 PDHA1P08559 390 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 FOSL2P15408 326 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 DMTNQ08495 405 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 PUDPQ08623 228 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 HERC4Q5GLZ8 1057 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ATP11CQ8NB49 1132 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 CUTAO60888 179 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 RECQLP46063 649 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-202ENST00000448238 C10orf76Q5T2E6 689 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ARMC3Q5W041 872 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 CCDC88BA6NC98 1476 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 SNX2O60749 519 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 MAGEB5Q9BZ81 275 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 TRAF3IP3Q9Y228 551 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 MYO1FO00160 1098 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 STXBP3O00186 592 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 SNPHO15079 494 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 NARS2Q96I59 477 aaKnown RBP9.61□□□□□ -0.87
NIPBL-202ENST00000448238 TUBGCP2Q9BSJ2 902 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 ECT2Q9H8V3 914 aa9.61□□□□□ -0.87
NIPBL-202ENST00000448238 KRT37O76014 449 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 ABCE1P61221 599 aaKnown RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 TMEM161AQ9NX61 479 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 EXOC1LA0A1B0GW35 172 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 SUPT3HO75486 399 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 HSPA2P54652 639 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 RPL19P84098 196 aaKnown RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 ANKS3Q6ZW76 656 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 APPL2Q8NEU8 664 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 FAM45AQ8TCE6 357 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 MAML3Q96JK9 1138 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 UNC45BQ8IWX7 931 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 RYBPQ8N488 228 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms