RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 HABP4Q5JVS0 413 aaKnown RBP7.66□□□□□ -1.18
USP49-205ENST00000448078 ANGEL2Q5VTE6 544 aaKnown RBP7.66□□□□□ -1.18
USP49-205ENST00000448078 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
USP49-205ENST00000448078 KRT26Q7Z3Y9 468 aa7.66□□□□□ -1.18
USP49-205ENST00000448078 CCDC74BQ96LY2 380 aa7.66□□□□□ -1.18
USP49-205ENST00000448078 FERD3LQ96RJ6 166 aa7.66□□□□□ -1.18
USP49-205ENST00000448078 CRAMP1Q96RY5 1269 aa7.66□□□□□ -1.18
USP49-205ENST00000448078 GBA2Q9HCG7 927 aaPredicted RBP7.66□□□□□ -1.18
USP49-205ENST00000448078 CNOT7Q9UIV1 285 aaKnown RBP7.66□□□□□ -1.18
USP49-205ENST00000448078 U3KQE9 123 aa7.66□□□□□ -1.18
USP49-205ENST00000448078 GARTP22102 1010 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 CD96P40200 585 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 CLCN7P51798 805 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 AFDNP55196 1824 aaKnown RBP7.65□□□□□ -1.18
USP49-205ENST00000448078 CXCL9Q07325 125 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 FER1L6Q2WGJ9 1857 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 ARSHQ5FYA8 562 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 OLFM4Q6UX06 510 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 DPP8Q6V1X1 898 aaPredicted RBP7.65□□□□□ -1.18
USP49-205ENST00000448078 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 PPP1R42Q7Z4L9 355 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 ZNF654Q8IZM8 581 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 ABI1Q8IZP0 508 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 PI4K2BQ8TCG2 481 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 COX4I2Q96KJ9 171 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 KIF2CQ99661 725 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 KCNH3Q9ULD8 1083 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 CEP131Q9UPN4 1083 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 SNX11Q9Y5W9 270 aa7.65□□□□□ -1.18
USP49-205ENST00000448078 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 ERVV-1B6SEH8 477 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 CD8BP10966 210 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 KIR3DL1P43629 444 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 CRKP46108 304 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 TMEM201Q5SNT2 666 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 DPF2Q92785 391 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 HSPA12BQ96MM6 686 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 ASCC2Q9H1I8 757 aaPredicted RBP7.64□□□□□ -1.19
USP49-205ENST00000448078 ZSWIM5Q9P217 1185 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 ATP6V0A2Q9Y487 856 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 KIF20BQ96Q89 1820 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 NRXN2Q9P2S2 1712 aa7.64□□□□□ -1.19
USP49-205ENST00000448078 NPC1L1Q9UHC9 1359 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 KIF7Q2M1P5 1343 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 U2SURPO15042 1029 aaKnown RBP7.63□□□□□ -1.19
USP49-205ENST00000448078 GREM1O60565 184 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 RAD17O75943 681 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 VAMP1P23763 118 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 FKBP1BP68106 108 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 ZP2Q05996 745 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 CRY2Q49AN0 593 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 FBXO46Q6PJ61 603 aaPredicted RBP7.63□□□□□ -1.19
USP49-205ENST00000448078 NT5DC4Q86YG4 428 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 SPACA3Q8IXA5 215 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 BAHD1Q8TBE0 780 aaPredicted RBP7.63□□□□□ -1.19
USP49-205ENST00000448078 NT5C1AQ9BXI3 368 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 LRRC3Q9BY71 257 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
USP49-205ENST00000448078 GMIPQ9P107 970 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 USP16Q9Y5T5 823 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 SLX4Q8IY92 1834 aa7.63□□□□□ -1.19
USP49-205ENST00000448078 DLEC1Q9Y238 1755 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 RPS12P25398 132 aaKnown RBP7.62□□□□□ -1.19
USP49-205ENST00000448078 ARHGEF6Q15052 776 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 CLEC16AQ2KHT3 1053 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 DDX46Q7L014 1031 aaKnown RBP7.62□□□□□ -1.19
USP49-205ENST00000448078 SPRED2Q7Z698 418 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 SP8Q8IXZ3 490 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 SLFN12Q8IYM2 578 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 NGEFQ8N5V2 710 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 IL17REQ8NFR9 667 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 UBE2FQ969M7 185 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 CCSER2Q9H7U1 834 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 CAPN6Q9Y6Q1 641 aa7.62□□□□□ -1.19
USP49-205ENST00000448078 TNRC18O15417 2968 aaPredicted RBP7.62□□□□□ -1.19
USP49-205ENST00000448078 FAM86C2PA6NEL3 165 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 UNCXA6NJT0 531 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 NF2P35240 595 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 CLCQ05315 142 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 TCIRG1Q13488 830 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 NKPD1Q17RQ9 610 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 LRRFIP1Q32MZ4 808 aaKnown RBP7.61□□□□□ -1.19
USP49-205ENST00000448078 PARP10Q53GL7 1025 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 LDLRAD1Q5T700 205 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 OVOS1Q6IE37 1185 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
USP49-205ENST00000448078 CRBNQ96SW2 442 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 TRIT1Q9H3H1 467 aaKnown RBP7.61□□□□□ -1.19
USP49-205ENST00000448078 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
USP49-205ENST00000448078 KCNQ5Q9NR82 932 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 DDX41Q9UJV9 622 aaKnown RBP7.61□□□□□ -1.19
USP49-205ENST00000448078 NUDCQ9Y266 331 aa7.61□□□□□ -1.19
USP49-205ENST00000448078 PRAMEF22A3QJZ6 481 aa7.6□□□□□ -1.19
USP49-205ENST00000448078 SLC22A31A6NKX4 558 aa7.6□□□□□ -1.19
USP49-205ENST00000448078 FKTNO75072 461 aa7.6□□□□□ -1.19
USP49-205ENST00000448078 KIAA2012Q0VF49 1180 aa7.6□□□□□ -1.19
USP49-205ENST00000448078 SREBF2Q12772 1141 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms