RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SLC9A1P19634 815 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 LPOP22079 712 aaPredicted RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 TPP2P29144 1249 aaPredicted RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 BCL6P41182 706 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 LSAMPQ13449 338 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 GTF2H3Q13889 308 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 LRRC32Q14392 662 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 TERF2Q15554 542 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 IL31Q6EBC2 164 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 OGFOD3Q6PK18 319 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 OSTM1Q86WC4 334 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 CMTR2Q8IYT2 770 aaKnown RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 HSPBAP1Q96EW2 488 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 SCYL1Q96KG9 808 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 PTCHD1Q96NR3 888 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 FOXP3Q9BZS1 431 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 TOPORSQ9NS56 1045 aaPredicted RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 NOP53Q9NZM5 478 aaKnown RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 TCFL5Q9UL49 500 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 ZNF652Q9Y2D9 606 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 TIMM13Q9Y5L4 95 aaPredicted RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 MRFAP1Q9Y605 127 aa8.13□□□□□ -1.11
COL11A1-205ENST00000447608 EIF4G1Q04637 1599 aaKnown RBP8.13□□□□□ -1.11
COL11A1-205ENST00000447608 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 C9orf172C9J069 976 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 H7C1D1 291 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 XPOTO43592 962 aaKnown RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 FKTNO75072 461 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 H2AFYO75367 372 aaKnown RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 ARHGEF15O94989 841 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 SPATA31C1P0DKV0 1188 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 ZBTB48P10074 688 aaPredicted RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 KRT15P19012 456 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 NEK3P51956 506 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 JAM2P57087 298 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 PCBP3P57721 371 aaKnown RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 KRT85P78386 507 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 LAPTM5Q13571 262 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 GRM3Q14832 879 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 ARHGAP29Q52LW3 1261 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 BEND4Q6ZU67 534 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 TSPYL5Q86VY4 417 aaPredicted RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 RASSF3Q86WH2 238 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
COL11A1-205ENST00000447608 PANK1Q8TE04 598 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 EVI5LQ96CN4 794 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 MEGF10Q96KG7 1140 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 SARGQ9BW04 601 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 BOCQ9BWV1 1114 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 CDADC1Q9BWV3 514 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 JAM3Q9BX67 310 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 MS4A5Q9H3V2 200 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 SMURF1Q9HCE7 757 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 RCAN3Q9UKA8 241 aa8.12□□□□□ -1.11
COL11A1-205ENST00000447608 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 KCNK3O14649 394 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 IL33O95760 270 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 NBPF7P0C2Y1 421 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-205ENST00000447608 ADMP35318 185 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 HTRA3P83110 453 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 GBX1Q14549 363 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 C10orf62Q5T681 223 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-205ENST00000447608 CDKAL1Q5VV42 579 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 PJA1Q8NG27 643 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 FBXO41Q8TF61 875 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 GATA6Q92908 595 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 TRIT1Q9H3H1 467 aaKnown RBP8.11□□□□□ -1.11
COL11A1-205ENST00000447608 CLDND1Q9NY35 253 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 DDX20Q9UHI6 824 aaKnown RBP8.11□□□□□ -1.11
COL11A1-205ENST00000447608 USP25Q9UHP3 1055 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 NOC2LQ9Y3T9 749 aaKnown RBP8.11□□□□□ -1.11
COL11A1-205ENST00000447608 SPO11Q9Y5K1 396 aa8.11□□□□□ -1.11
COL11A1-205ENST00000447608 SLC12A8A0AV02 714 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 C7orf72A4D263 438 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 TRIM75PA6NK02 468 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 DVL2O14641 736 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 AMY2AP04746 511 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 ASGR2P07307 311 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 IFIT2P09913 472 aaKnown RBP8.1□□□□□ -1.11
COL11A1-205ENST00000447608 AMY2BP19961 511 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 GPR3P46089 330 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 RPL11P62913 178 aaKnown RBP8.1□□□□□ -1.11
COL11A1-205ENST00000447608 SMAD3P84022 425 aaKnown RBP8.1□□□□□ -1.11
COL11A1-205ENST00000447608 ZNF174Q15697 407 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
COL11A1-205ENST00000447608 CLUL1Q15846 466 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 C4orf46Q504U0 113 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 FAM9AQ8IZU1 332 aaPredicted RBP8.1□□□□□ -1.11
COL11A1-205ENST00000447608 KIAA1958Q8N8K9 716 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 DPF3Q92784 378 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 TBC1D32Q96NH3 1257 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 AIFM3Q96NN9 605 aa8.1□□□□□ -1.11
COL11A1-205ENST00000447608 ELF4Q99607 663 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms