RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GNPTABQ3T906 1256 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 BRDTQ58F21 947 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-204ENST00000446876 CELF3Q5SZQ8 465 aaKnown RBP16.99■□□□□ 0.31
HDAC4-204ENST00000446876 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 DHX37Q8IY37 1157 aaKnown RBP16.99■□□□□ 0.31
HDAC4-204ENST00000446876 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 KIF2CQ99661 725 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 MTG1Q9BT17 334 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-204ENST00000446876 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
HDAC4-204ENST00000446876 ESYT2A0FGR8 921 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 FIBPO43427 364 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 STAM2O75886 525 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 ITGB5P18084 799 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 ICAM3P32942 547 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 CHMP4BP1P59074 171 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 LAMC2Q13753 1193 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 MYSM1Q5VVJ2 828 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 XRRA1Q6P2D8 792 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 CPLX2Q6PUV4 134 aaKnown RBP16.98■□□□□ 0.31
HDAC4-204ENST00000446876 FAM126BQ8IXS8 530 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 SLC43A3Q8NBI5 491 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 EMID1Q96A84 441 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-204ENST00000446876 GDF15Q99988 308 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 PRO3102Q9H379 93 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 EHMT1Q9H9B1 1298 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 C6orf50Q9HD87 102 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 PKD2L1Q9P0L9 805 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 TELO2Q9Y4R8 837 aa16.98■□□□□ 0.31
HDAC4-204ENST00000446876 DCDC2CA8MYV0 355 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 DEXIO95424 95 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 CTDNEP1O95476 244 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 ITGB8P26012 769 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 HSDL1Q3SXM5 330 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 NLRX1Q86UT6 975 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 PPTC7Q8NI37 304 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 CCDC12Q8WUD4 166 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-204ENST00000446876 SPATA33Q96N06 139 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 TOX2Q96NM4 488 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 UBIAD1Q9Y5Z9 338 aa16.97■□□□□ 0.31
HDAC4-204ENST00000446876 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 FOSP01100 380 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-204ENST00000446876 TGFB3P10600 412 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 SP4Q02446 784 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 ST3GAL1Q11201 340 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 CYFIP1Q7L576 1253 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 REXO1Q8N1G1 1221 aaKnown RBP16.96■□□□□ 0.31
HDAC4-204ENST00000446876 CCDC148Q8NFR7 591 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 CYP2W1Q8TAV3 490 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 KAT2BQ92831 832 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 GTF3C6Q969F1 213 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 GLT8D2Q9H1C3 349 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 TRPV6Q9H1D0 765 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 MLXIPQ9HAP2 919 aa16.96■□□□□ 0.31
HDAC4-204ENST00000446876 TRIOBPQ9H2D6 2365 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 B4GALT4O60513 344 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 KPNA6O60684 536 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 ATP9AO75110 1047 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 CDKL5O76039 1030 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 CD4P01730 458 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 SREBF1P36956 1147 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 RBM25P49756 843 aaKnown RBP16.95■□□□□ 0.3
HDAC4-204ENST00000446876 NLRP5P59047 1200 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 ARHGAP4P98171 946 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 DGKDQ16760 1214 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 FAM47CQ5HY64 1035 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 HABP4Q5JVS0 413 aaKnown RBP16.95■□□□□ 0.3
HDAC4-204ENST00000446876 BADQ92934 168 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 GPRASP2Q96D09 838 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 LBHD1Q9BQE6 289 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-204ENST00000446876 JADE2Q9NQC1 790 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 TRMT13Q9NUP7 481 aaKnown RBP16.95■□□□□ 0.3
HDAC4-204ENST00000446876 TBX21Q9UL17 535 aa16.95■□□□□ 0.3
HDAC4-204ENST00000446876 TLR3O15455 904 aaKnown RBP16.94■□□□□ 0.3
HDAC4-204ENST00000446876 KCNA2P16389 499 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 GNA11P29992 359 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 MTMR1Q13613 665 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 NEDD9Q14511 834 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 TEX2Q8IWB9 1127 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 MXRA8Q9BRK3 442 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 PPP1R12CQ9BZL4 782 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 UBE2OQ9C0C9 1292 aaKnown RBP16.94■□□□□ 0.3
HDAC4-204ENST00000446876 SH3GLB2Q9NR46 395 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 GJB4Q9NTQ9 266 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 KCNJ14Q9UNX9 436 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 STK36Q9NRP7 1315 aa16.94■□□□□ 0.3
HDAC4-204ENST00000446876 JAK2O60674 1132 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 ARP10275 920 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 HOXD8P13378 290 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-204ENST00000446876 RAG1P15918 1043 aa16.93■□□□□ 0.3
HDAC4-204ENST00000446876 PSEN2P49810 448 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms