RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
LINC00440-201ENST00000446579 MCMBPQ9BTE3 642 aa6.54□□□□□ -1.36
LINC00440-201ENST00000446579 IER2Q9BTL4 223 aa6.54□□□□□ -1.36
LINC00440-201ENST00000446579 XYLT2Q9H1B5 865 aa6.54□□□□□ -1.36
LINC00440-201ENST00000446579 RTEL1Q9NZ71 1219 aa6.54□□□□□ -1.36
LINC00440-201ENST00000446579 SFMBT1Q9UHJ3 866 aa6.54□□□□□ -1.36
LINC00440-201ENST00000446579 MCM8Q9UJA3 840 aa6.54□□□□□ -1.36
LINC00440-201ENST00000446579 TRBV23OR9-2A0A075B6M9 112 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 ALG1L2C9J202 215 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 STXBP3O00186 592 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 DLX3O60479 287 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 EFCAB14O75071 495 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 GFRA1P56159 465 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 YBX1P67809 324 aaKnown RBP6.53□□□□□ -1.36
LINC00440-201ENST00000446579 GABREP78334 506 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 NFKB2Q00653 900 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 MVKQ03426 396 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 PPM1KQ8N3J5 372 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 SLC7A14Q8TBB6 771 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 BTN2A2Q8WVV5 523 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 PPP1R14AQ96A00 147 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 TNFRSF12AQ9NP84 129 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 CHPF2Q9P2E5 772 aa6.53□□□□□ -1.36
LINC00440-201ENST00000446579 A0A1W2PQJ5 194 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 KCNH1O95259 989 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 NPTXRO95502 500 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 EYA4O95677 639 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 SCG5P05408 212 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 HOXC12P31275 282 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 NCKAP1LP55160 1127 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 BRDTQ58F21 947 aaPredicted RBP6.52□□□□□ -1.37
LINC00440-201ENST00000446579 CT47A1Q5JQC4 288 aaPredicted RBP6.52□□□□□ -1.37
LINC00440-201ENST00000446579 ERICH6BQ5W0A0 696 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 LDHDQ86WU2 507 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 EPB41L4AQ9HCS5 686 aaPredicted RBP6.52□□□□□ -1.37
LINC00440-201ENST00000446579 PDLIM7Q9NR12 457 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 KLHL14Q9P2G3 628 aa6.52□□□□□ -1.37
LINC00440-201ENST00000446579 PAMP19021 973 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 NR1I3Q14994 352 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 ODR4Q5SWX8 454 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 SLC35F1Q5T1Q4 408 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 GTF2IRD2BQ6EKJ0 949 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 BRAPQ7Z569 592 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 PRRT2Q7Z6L0 340 aaPredicted RBP6.51□□□□□ -1.37
LINC00440-201ENST00000446579 GTF2IRD2Q86UP8 949 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 FAM129CQ86XR2 697 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 CXorf38Q8TB03 319 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 KCTD13Q8WZ19 329 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 PWWP2AQ96N64 755 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 CEP89Q96ST8 783 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
LINC00440-201ENST00000446579 NPHP3-ACAD11A0A0J9YXS1 232 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
LINC00440-201ENST00000446579 ASLP04424 464 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 CELA3BP08861 270 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 MSL3P1P0C860 447 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 EVA1CP58658 441 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 NTRK3Q16288 839 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 PAQR3Q6TCH7 311 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 MAMDC2Q7Z304 686 aaPredicted RBP6.5□□□□□ -1.37
LINC00440-201ENST00000446579 TMEFF1Q8IYR6 380 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 AHI1Q8N157 1196 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 UBR7Q8N806 425 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 PTPRN2Q92932 1015 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 CYP26B1Q9NR63 512 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 G3BP2Q9UN86 482 aaKnown RBP6.5□□□□□ -1.37
LINC00440-201ENST00000446579 JAG2Q9Y219 1238 aa6.5□□□□□ -1.37
LINC00440-201ENST00000446579 THRAP3Q9Y2W1 955 aaKnown RBP6.5□□□□□ -1.37
LINC00440-201ENST00000446579 SRGAP3O43295 1099 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 BUB1BO60566 1050 aaPredicted RBP6.49□□□□□ -1.37
LINC00440-201ENST00000446579 CPP00450 1065 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 CYBBP04839 570 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 CPEP16870 476 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 CYP4F3Q08477 520 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 SCRN1Q12765 414 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 DHCR24Q15392 516 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 SKOR2Q2VWA4 1001 aaPredicted RBP6.49□□□□□ -1.37
LINC00440-201ENST00000446579 HSP90AB2PQ58FF8 381 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 BICRALQ6AI39 1079 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 CNNM4Q6P4Q7 775 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 DBX2Q6ZNG2 339 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 FGD2Q7Z6J4 655 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 IGDCC3Q8IVU1 814 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 JDP2Q8WYK2 163 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 COPS5Q92905 334 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 SCLYQ96I15 445 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 ADAM7Q9H2U9 754 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 NDOR1Q9UHB4 597 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 FAN1Q9Y2M0 1017 aa6.49□□□□□ -1.37
LINC00440-201ENST00000446579 MAPKAPK2P49137 400 aa6.48□□□□□ -1.37
LINC00440-201ENST00000446579 TESK1Q15569 626 aa6.48□□□□□ -1.37
LINC00440-201ENST00000446579 SF1Q15637 639 aaKnown RBP6.48□□□□□ -1.37
LINC00440-201ENST00000446579 WWC2Q6AWC2 1192 aa6.48□□□□□ -1.37
LINC00440-201ENST00000446579 RPTNQ6XPR3 784 aa6.48□□□□□ -1.37
LINC00440-201ENST00000446579 DDX46Q7L014 1031 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms