RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 KRT26Q7Z3Y9 468 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 KCNK18Q7Z418 384 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 NAA15Q9BXJ9 866 aaKnown RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 SRRTQ9BXP5 876 aaKnown RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 TANGO6Q9C0B7 1094 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 ASTN2O75129 1339 aaPredicted RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 POTEB3A0JP26 581 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 TRIM49BA6NDI0 452 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 POTECB2RU33 542 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 PLA2G4BP0C869 781 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 FCER1AP12319 257 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 MUTP22033 750 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 LRRC63Q05C16 580 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 EHHADHQ08426 723 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 CENPPQ6IPU0 288 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 POTEBQ6S5H4 581 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 CNGA4Q8IV77 575 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 KIAA0895Q8NCT3 520 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 GJA10Q969M2 543 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 PANX2Q96RD6 677 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 POLR3CQ9BUI4 534 aaPredicted RBP17.48■□□□□ 0.39
SNX13-204ENST00000444712 SLC38A10Q9HBR0 1119 aa17.48■□□□□ 0.39
SNX13-204ENST00000444712 TEX33O43247 280 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 TNNT1P13805 278 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 TAL1P17542 331 aaPredicted RBP17.47■□□□□ 0.39
SNX13-204ENST00000444712 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
SNX13-204ENST00000444712 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 TC2NQ8N9U0 490 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 C16orf45Q96MC5 204 aaPredicted RBP17.47■□□□□ 0.39
SNX13-204ENST00000444712 TSG101Q99816 390 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
SNX13-204ENST00000444712 VAV3Q9UKW4 847 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 PPP1R9AQ9ULJ8 1098 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
SNX13-204ENST00000444712 DNM3Q9UQ16 869 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 ZNF536O15090 1300 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 ZBED4O75132 1171 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 MED24O75448 989 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 VCAM1P19320 739 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 MTMR2Q13614 643 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 CEP55Q53EZ4 464 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 DNAJC19Q96DA6 116 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 TUFT1Q9NNX1 390 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 SLC39A2Q9NP94 309 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 PANK4Q9NVE7 773 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 TAB2Q9NYJ8 693 aa17.47■□□□□ 0.39
SNX13-204ENST00000444712 A0A1W2PQC6 194 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 C19orf81C9J6K1 198 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 ZSCAN12O43309 604 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 FLOT1O75955 427 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 SSBP05455 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX13-204ENST00000444712 PMS1P54277 932 aaKnown RBP17.46■□□□□ 0.39
SNX13-204ENST00000444712 BACE1P56817 501 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 COASYQ13057 564 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 PPP2R5CQ13362 524 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 CATSPER3Q86XQ3 398 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 ZNF280CQ8ND82 737 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 SLC5A5Q92911 643 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 DUSP9Q99956 384 aaKnown RBP17.46■□□□□ 0.39
SNX13-204ENST00000444712 VPS16Q9H269 839 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 PAXBP1Q9Y5B6 917 aa17.46■□□□□ 0.39
SNX13-204ENST00000444712 LGALS16A8MUM7 142 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 E9PMD0 336 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 STAT3P40763 770 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 DNM2P50570 870 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 LRCH2Q5VUJ6 765 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 ANKRD40Q6AI12 368 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 NIPA1Q7RTP0 329 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 IRF2BP1Q8IU81 584 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 C12orf42Q96LP6 360 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 AGBL1Q96MI9 1066 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 RPTORQ8N122 1335 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 GOLGA6L9A6NEM1 432 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 COBLO75128 1261 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
SNX13-204ENST00000444712 BCRP11274 1271 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 SLC12A3P55017 1021 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
SNX13-204ENST00000444712 NYAP1Q6ZVC0 841 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 CREBRFQ8IUR6 639 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 SYT2Q8N9I0 419 aaPredicted RBP17.45■□□□□ 0.38
SNX13-204ENST00000444712 TRPM4Q8TD43 1214 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 RPAP3Q9H6T3 665 aaPredicted RBP17.45■□□□□ 0.38
SNX13-204ENST00000444712 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
SNX13-204ENST00000444712 GAS7O60861 476 aa17.44■□□□□ 0.38
SNX13-204ENST00000444712 PSMD10O75832 226 aa17.44■□□□□ 0.38
SNX13-204ENST00000444712 PTPRAP18433 802 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms